Commits · 64c8de96bca0739a8ce99a49c4f6d5f3f8313ebd · Mirrors / biopet.biopet

Aug 03, 2015
- Merge branch 'feature-upgrade_queue_3.4' into 'develop' · 64c8de96
  bow authored 9 years ago
  
  Feature upgrade queue 3.4 see also #175 See merge request !203
  64c8de96
- Merge branch 'feature-add_toucan_to_shiva' into 'develop' · ac634ac1
  bow authored 9 years ago
  
  Feature add toucan to shiva see also #176 and #182 and #183 See merge request !204
  ac634ac1
Aug 01, 2015
- Fix unit test · d05d08f9
  Peter van 't Hof authored 9 years ago
  
  d05d08f9
- Improved unit test · 7f682612
  Peter van 't Hof authored 9 years ago
  
  7f682612
- Fix unit test · 93080450
  Peter van 't Hof authored 9 years ago
  
  93080450
- Fix inspection warnings · 9b8e7dd8
  Peter van 't Hof authored 9 years ago
  
  9b8e7dd8
- Adding exac annotation step · 046d7d2b
  Peter van 't Hof authored 9 years ago
  
  046d7d2b
- Adding gonl annotation step · 4459b837
  Peter van 't Hof authored 9 years ago
  
  4459b837
- Change List[File] to File · 61926852
  Peter van 't Hof authored 9 years ago
  
  61926852
- Changed name · 3e3cbed9
  Peter van 't Hof authored 9 years ago
  
  3e3cbed9
- Adding biopet extension for VcfWithVcf tool · 53782d96
  Peter van 't Hof authored 9 years ago
  
  53782d96
- Adding toucan to shiva · 8e606123
  Peter van 't Hof authored 9 years ago
  
  8e606123
- Changing error text · d7efc98b
  Peter van 't Hof authored 9 years ago
  
  d7efc98b
- Name fix · 69a3c90f
  Peter van 't Hof authored 9 years ago
  
  69a3c90f
- Add summary to toucan · 2fe05703
  Peter van 't Hof authored 9 years ago
  
  2fe05703
- Saver execution order · 3584a778
  Peter van 't Hof authored 9 years ago
  
  3584a778
- Fix flag default · f95a231c
  Peter van 't Hof authored 9 years ago
  
  f95a231c
- Replace getChr for getContig · ab759337
  Peter van 't Hof authored 9 years ago
  
  ab759337
- Replace getSequence for getContig · 8360ae8d
  Peter van 't Hof authored 9 years ago
  
  8360ae8d
- Fix executing class · fa935dce
  Peter van 't Hof authored 9 years ago
  
  fa935dce
- Fix method · 57cf8d95
  Peter van 't Hof authored 9 years ago
  
  57cf8d95
- Upgrade to Queue 3.4 · a0364182
  Peter van 't Hof authored 9 years ago
  
  a0364182
Jul 30, 2015
- Fix typo · 182492a4
  Peter van 't Hof authored 9 years ago
  
  182492a4
- Merge remote-tracking branch 'remotes/origin/release-0.4.0' into develop · 763bc9a9
  Peter van 't Hof authored 9 years ago
  
  763bc9a9
- Bumb version to 0.5.0-DEV · c3b83b90
  Peter van 't Hof authored 9 years ago
  
  c3b83b90
- Bumb version to 0.4.0 · 6186881d
  Peter van 't Hof authored 9 years ago
  
  6186881d
- Fix bug on log file · 002e9052
  Peter van 't Hof authored 9 years ago
  
  002e9052
- Remove memory requirements, no need for this tool · 60d53966
  Peter van 't Hof authored 9 years ago
  
  60d53966
Jul 28, 2015
- Upgrade to new version of mkdocs config · 5bed902a
  Peter van 't Hof authored 9 years ago
  
  5bed902a
- updating docs for flexiprep · 38ec7a1d
  Peter van 't Hof authored 9 years ago
  
  38ec7a1d
- Remove some defaults · bc2a511c
  Peter van 't Hof authored 9 years ago
  
  bc2a511c
- Adding more information about variantcallers · f634582b
  Peter van 't Hof authored 9 years ago
  
  f634582b
- Added yaml · 08e4b344
  Peter van 't Hof authored 9 years ago
  
  08e4b344
- Remove duplicate file · dcd106b2
  Peter van 't Hof authored 9 years ago
  
  dcd106b2
- Bumb version to 0.4.0-RC2 · d5834cba
  Peter van 't Hof authored 9 years ago
  
  View commits for tag v0.4.0-RC2 v0.4.0-RC2
  
  d5834cba
- 1 level nested output_dir now allowed for log file · f79469b3
  Peter van 't Hof authored 9 years ago
  
  f79469b3
- Added bam index as dependency · aeb0739f
  Peter van 't Hof authored 9 years ago
  
  aeb0739f
- updating options for Mapping · 42e56640
  Peter van 't Hof authored 9 years ago
  
  42e56640
- Adding minimal config · 67d911cd
  Peter van 't Hof authored 9 years ago
  
  67d911cd
- Fixed link · b0289eef
  Peter van 't Hof authored 9 years ago
  
  b0289eef