Commit 002e9052 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix bug on log file

parent 60d53966
......@@ -84,7 +84,7 @@ trait PipelineCommand extends MainCommand with GatkLogging {
argv ++= Array("-S", pipeline)
argv ++= args
if (!args.contains("--log_to_file") && !args.contains("-log")) {
argv ++= List("--log_to_file", logFile.getAbsolutePath.replace("biopet", "queue"))
argv ++= List("--log_to_file", new File(logFile.getParentFile, "queue." + BiopetQCommandLine.timestamp + ".log").getAbsolutePath)
}
BiopetQCommandLine.main(argv)
}
......
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