Commit aeb0739f authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Added bam index as dependency

parent 42e56640
......@@ -42,6 +42,11 @@ class DellyCaller(val root: Configurable) extends BiopetCommandLineFunction {
@Argument(doc = "What kind of analysis to run: DEL,DUP,INV,TRA")
var analysistype: String = _
override def beforeGraph(): Unit = {
super.beforeGraph()
deps ::= new File(input.getParentFile, input.getName + ".bai")
}
def cmdLine = required(executable) +
"-t" + required(analysistype) +
"-o" + required(outputvcf) +
......
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