Commits · 2b882e6f588e5286683ea590acfa166a7c03bba4 · Mirrors / biopet.biopet

Dec 23, 2015
- Added sorting for samples · 2b882e6f
  Peter van 't Hof authored 9 years ago
  
  2b882e6f
- Added function to convert kraken to krona output · 55b5629d
  Peter van 't Hof authored 9 years ago
  
  55b5629d
Dec 18, 2015
- Added tool for merging otu maps · 0b1fec3f
  Peter van 't Hof authored 9 years ago
  
  0b1fec3f
- Add settings · 86e7d090
  Peter van 't Hof authored 9 years ago
  
  86e7d090
- Fixed double flexiprep · 8acebe9a
  Peter van 't Hof authored 9 years ago
  
  8acebe9a
- Remove unneeded if statement · d7984e09
  Peter van 't Hof authored 9 years ago
  
  d7984e09
- Fixed sample and lib id for flexiprep · 5aa027a2
  Peter van 't Hof authored 9 years ago
  
  5aa027a2
- Fix sample IDs · 67db8906
  Peter van 't Hof authored 9 years ago
  
  67db8906
Dec 17, 2015
- Style fixes · 43100197
  Peter van 't Hof authored 9 years ago
  
  43100197
- Switch to sample based analysis · 08070144
  Peter van 't Hof authored 9 years ago
  
  08070144
- Fixed wrong job · c5669b7b
  Peter van 't Hof authored 9 years ago
  
  c5669b7b
- Removed unused import · 6e2abf91
  Peter van 't Hof authored 9 years ago
  
  6e2abf91
- Adding todo's · 7e27eee9
  Peter van 't Hof authored 9 years ago
  
  7e27eee9
- Added merge of otu tables and maps · 83c0d1ee
  Peter van 't Hof authored 9 years ago
  
  83c0d1ee
- Expose subpipelines · 0a25827e
  Peter van 't Hof authored 9 years ago
  
  0a25827e
- Added output files · 9c1384fb
  Peter van 't Hof authored 9 years ago
  
  9c1384fb
Dec 16, 2015
- Fixed outputdir · 4e8e65b2
  Peter van 't Hof authored 9 years ago
  
  4e8e65b2
- Removed unused import · 09ec3169
  Peter van 't Hof authored 9 years ago
  
  09ec3169
- Simplify modules · af8d9361
  Peter van 't Hof authored 9 years ago
  
  af8d9361
- Added closed reference method · c6a89d92
  Peter van 't Hof authored 9 years ago
  
  c6a89d92
- Change default regexes · 283d34e3
  Peter van 't Hof authored 9 years ago
  
  283d34e3
Dec 11, 2015
- fixed import · 910c0048
  Peter van 't Hof authored 9 years ago
  
  910c0048
- fixed flexiprep summary · 2755d09a
  Peter van 't Hof authored 9 years ago
  
  2755d09a
- Added report · 5d9c7d3a
  Peter van 't Hof authored 9 years ago
  
  5d9c7d3a
Dec 10, 2015
- fixed outputDir flexiprep · b98a0345
  Peter van 't Hof authored 9 years ago
  
  b98a0345
- Fixed code warnings · 7f48f593
  Peter van 't Hof authored 9 years ago
  
  7f48f593
- Added multisample gears report · 1b5553ec
  Peter van 't Hof authored 9 years ago
  
  1b5553ec
- Fixed unit testing · 8427c6a6
  Peter van 't Hof authored 9 years ago
  
  8427c6a6
- style changes · d03a8edd
  Peter van 't Hof authored 9 years ago
  
  d03a8edd
- Added SplitLibrariesFastq · 857a2b9c
  Peter van 't Hof authored 9 years ago
  
  857a2b9c
- Added a default · 5ad3e1c7
  Peter van 't Hof authored 9 years ago
  
  5ad3e1c7
- Added flexiprep · 89753299
  Peter van 't Hof authored 9 years ago
  
  89753299
Dec 07, 2015
- Remove unused imports · 790eb131
  Peter van 't Hof authored 9 years ago
  
  790eb131
Dec 04, 2015
- Fixed name output dir · 6f20e990
  Peter van 't Hof authored 9 years ago
  
  6f20e990
- Fixed args for pickRepSet · 5b602ecf
  Peter van 't Hof authored 9 years ago
  
  5b602ecf
- Fixed RepSet · cfe22b5c
  Peter van 't Hof authored 9 years ago
  
  cfe22b5c
- Style fix · c962c575
  Peter van 't Hof authored 9 years ago
  
  c962c575
- Changes defaults · 925f5b4d
  Peter van 't Hof authored 9 years ago
  
  925f5b4d
- Added AssignTaxonomy step · 53ab6faa
  Peter van 't Hof authored 9 years ago
  
  53ab6faa
- Change default · 8bb13813
  Peter van 't Hof authored 9 years ago
  
  8bb13813