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biopet.biopet
Commits
4e8e65b2
Commit
4e8e65b2
authored
Dec 16, 2015
by
Peter van 't Hof
Browse files
Fixed outputdir
parent
09ec3169
Changes
1
Hide whitespace changes
Inline
Side-by-side
public/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/GearsSingle.scala
View file @
4e8e65b2
...
...
@@ -112,7 +112,7 @@ class GearsSingle(val root: Configurable) extends QScript with SummaryQScript wi
if
(
gearsUserQiimeClosed
)
{
val
qiimeClosed
=
new
GearsQiimeClosed
(
this
)
qiimeClosed
.
outputDir
=
new
File
(
outputDir
,
"qiime_
rtax
"
)
qiimeClosed
.
outputDir
=
new
File
(
outputDir
,
"qiime_
closed
"
)
qiimeClosed
.
fastqR1
=
flexiprep
.
fastqR1Qc
qiimeClosed
.
fastqR2
=
flexiprep
.
fastqR2Qc
add
(
qiimeClosed
)
...
...
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