Fixed outputdir

4e8e65b2 · Peter van 't Hof · 09ec3169 · 4e8e65b2
Commit 4e8e65b2 authored Dec 16, 2015 by Peter van 't Hof
--- a/public/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/GearsSingle.scala
+++ b/public/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/GearsSingle.scala
@@ -112,7 +112,7 @@ class GearsSingle(val root: Configurable) extends QScript with SummaryQScript wi

    if (gearsUserQiimeClosed) {
      val qiimeClosed = new GearsQiimeClosed(this)
-      qiimeClosed.outputDir = new File(outputDir, "qiime_rtax")
+      qiimeClosed.outputDir = new File(outputDir, "qiime_closed")
      qiimeClosed.fastqR1 = flexiprep.fastqR1Qc
      qiimeClosed.fastqR2 = flexiprep.fastqR2Qc
      add(qiimeClosed)