Commit 283d34e3 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Change default regexes

parent 910c0048
......@@ -28,6 +28,11 @@ class GearsQiimeRtax(val root: Configurable) extends QScript with BiopetQScript
),
"splitlibrariesfastq" -> Map(
"barcode_type" -> "not-barcoded"
),
"assigntaxonomy" -> Map(
"amplicon_id_regex" -> """(\S+)\s+(\S+?)""",
"header_id_regex" -> """S+s+(S+?)""",
"read_id_regex" -> """S+s+(S+)"""
)
)
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment