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biopet.biopet
Commits
d7984e09
Commit
d7984e09
authored
Dec 18, 2015
by
Peter van 't Hof
Browse files
Remove unneeded if statement
parent
5aa027a2
Changes
1
Hide whitespace changes
Inline
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public/gears/src/main/scala/nl/lumc/sasc/biopet/pipelines/gears/Gears.scala
View file @
d7984e09
...
...
@@ -102,11 +102,9 @@ class Gears(val root: Configurable) extends QScript with MultiSampleQScript { qs
protected
def
addJobs
()
:
Unit
=
{
add
(
flexiprep
)
if
(
gs
.
fastqR1
.
isDefined
||
gs
.
bamFile
.
isDefined
)
{
gs
.
fastqR1
=
Some
(
flexiprep
.
fastqR1Qc
)
gs
.
fastqR2
=
flexiprep
.
fastqR2Qc
add
(
gs
)
}
gs
.
fastqR1
=
Some
(
flexiprep
.
fastqR1Qc
)
gs
.
fastqR2
=
flexiprep
.
fastqR2Qc
add
(
gs
)
}
/** Must return files to store into summary */
...
...
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