Commits · ff181760d8a4ad115b34de24502db722d6f11614 · Mirrors / biopet.biopet

Feb 04, 2016
- Added testing to gears pipeline · ff181760
  Peter van 't Hof authored 9 years ago
  
  ff181760
- Added more methods to test · 95882d8e
  Peter van 't Hof authored 9 years ago
  
  95882d8e
Feb 02, 2016
- Added md5 check to pipeline · f941cb35
  Peter van 't Hof authored 9 years ago
  
  f941cb35
Jan 20, 2016
- Fix compile issue · 8afdecfc
  Peter van 't Hof authored 9 years ago
  
  8afdecfc
Jan 05, 2016
- Fixed executable in test · 9e4144e8
  Peter van 't Hof authored 9 years ago
  
  9e4144e8
Dec 30, 2015
- Fix summary jobs · a8c6edc8
  Peter van 't Hof authored 9 years ago
  
  a8c6edc8
Dec 29, 2015
- Fix adapters · 338df07e
  Peter van 't Hof authored 9 years ago
  
  338df07e
- Fixed output files · 61da844e
  Peter van 't Hof authored 9 years ago
  
  61da844e
- Fixed emty list · 07c60ba5
  Peter van 't Hof authored 9 years ago
  
  07c60ba5
- Style changes · ff8bbecb
  Peter van 't Hof authored 9 years ago
  
  ff8bbecb
- Remove unused lines · ea2bdb56
  Peter van 't Hof authored 9 years ago
  
  ea2bdb56
- Added count seqs · 3b55324c
  Peter van 't Hof authored 9 years ago
  
  3b55324c
- Added combine reads for GearsSingle · 03c15ef3
  Peter van 't Hof authored 9 years ago
  
  03c15ef3
- Init for mini pipeline for combining reads · ca7bba56
  Peter van 't Hof authored 9 years ago
  
  ca7bba56
- Moved flash as general job · b5c6727b
  Peter van 't Hof authored 9 years ago
  
  b5c6727b
Dec 26, 2015
- Fix summary jobs · b611f85e
  Peter van 't Hof authored 9 years ago
  
  b611f85e
Dec 25, 2015
- Added QC page to gears report · 4295a7bd
  Peter van 't Hof authored 9 years ago
  
  4295a7bd
- Added krona plot for cqiime closed to gears report · 3d39733e
  Peter van 't Hof authored 9 years ago
  
  3d39733e
- Added template for biom to krona · c8012021
  Peter van 't Hof authored 9 years ago
  
  c8012021
- Changes name · e133158f
  Peter van 't Hof authored 9 years ago
  
  e133158f
- Added merge output of qiimeClosed · 211b5e18
  Peter van 't Hof authored 9 years ago
  
  211b5e18
Dec 24, 2015
- Changed file names · 233d9a9b
  Peter van 't Hof authored 9 years ago
  
  233d9a9b
- Adding summary to qiime closed · 975ef9a2
  Peter van 't Hof authored 9 years ago
  
  975ef9a2
- Added multisample krona plot · e270ea9d
  Peter van 't Hof authored 9 years ago
  
  e270ea9d
- Switch to krona plots · 38e13cdd
  Peter van 't Hof authored 9 years ago
  
  38e13cdd
- Added krona web dependencies · dceac7c8
  Peter van 't Hof authored 9 years ago
  
  dceac7c8
- Added unclasified reads · d2025738
  Peter van 't Hof authored 9 years ago
  
  d2025738
- Add biom to krona method · 05bcfc19
  Peter van 't Hof authored 9 years ago
  
  05bcfc19
- Added whitespace · 30233a07
  Peter van 't Hof authored 9 years ago
  
  30233a07
Dec 23, 2015
- Added a prettyXmlPrinter · 3c5e4e88
  Peter van 't Hof authored 9 years ago
  
  3c5e4e88
- Added sorting for samples · 2b882e6f
  Peter van 't Hof authored 9 years ago
  
  2b882e6f
- Added function to convert kraken to krona output · 55b5629d
  Peter van 't Hof authored 9 years ago
  
  55b5629d
Dec 18, 2015
- Added tool for merging otu maps · 0b1fec3f
  Peter van 't Hof authored 9 years ago
  
  0b1fec3f
- Add settings · 86e7d090
  Peter van 't Hof authored 9 years ago
  
  86e7d090
- Fixed double flexiprep · 8acebe9a
  Peter van 't Hof authored 9 years ago
  
  8acebe9a
- Remove unneeded if statement · d7984e09
  Peter van 't Hof authored 9 years ago
  
  d7984e09
- Fixed sample and lib id for flexiprep · 5aa027a2
  Peter van 't Hof authored 9 years ago
  
  5aa027a2
- Fix sample IDs · 67db8906
  Peter van 't Hof authored 9 years ago
  
  67db8906
Dec 17, 2015
- Style fixes · 43100197
  Peter van 't Hof authored 9 years ago
  
  43100197
- Switch to sample based analysis · 08070144
  Peter van 't Hof authored 9 years ago
  
  08070144