1. 14 Mar, 2016 17 commits
  2. 13 Mar, 2016 4 commits
  3. 11 Mar, 2016 11 commits
  4. 10 Mar, 2016 6 commits
  5. 09 Mar, 2016 2 commits
    • Peter van 't Hof's avatar
      Merge branch 'feature-docs-0.6.0' into 'develop' · 74cbd401
      Peter van 't Hof authored
      Feature docs 0.6.0
      
      TODO:
      
      - [x] ***Gears*** pipeline needs an example config
      - [x] ***Gentrap*** refactored
      - [ ] ***Toucan*** needs an disclaimer: When used with the Varda Db it assumes 2 vcf files as input
      - [ ] ***Shiva*** add reference_fa to Required settings (maybe in all pipelines)
      - [ ] ***Shiva*** add all variantcallers to the list of available variantcallers
      - [ ] ***Shiva*** explain about public / private version of Shiva
      - [ ] ***ShivaSVCalling*** 
      - [ ] ***TinyCap*** add new documentation about the smallRNA pipeline.
      - [x] ***Developer docs*** solves #261 - missing paragraph about the config and example code to implement using of the `config` in extensions/pipelines
      
      
      Fixes #261 and #264
      
      See merge request !315
      74cbd401
    • Peter van 't Hof's avatar