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biopet.biopet
Commits
b6e78a5c
Commit
b6e78a5c
authored
Mar 11, 2016
by
Wai Yi Leung
Browse files
Fix typo
parent
03d1f4f9
Changes
1
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public/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/SeqStat.scala
View file @
b6e78a5c
...
...
@@ -122,7 +122,7 @@ object SeqStat extends ToolCommand {
*
* @param record FastqRecord
*/
def
procesRead
(
record
:
FastqRecord
)
:
Unit
=
{
def
proces
s
Read
(
record
:
FastqRecord
)
:
Unit
=
{
// Adjust/expand the length of baseStat case classes to the size of current
// read if the current list is not long enough to store the data
...
...
@@ -166,7 +166,7 @@ object SeqStat extends ToolCommand {
def
seqStat
(
fqreader
:
FastqReader
)
:
Long
=
{
var
numReads
:
Long
=
0
for
(
read
<-
fqreader
.
iterator
.
asScala
)
{
procesRead
(
read
)
proces
s
Read
(
read
)
numReads
+=
1
}
...
...
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