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biopet.biopet
Commits
c10bb10f
Commit
c10bb10f
authored
Mar 14, 2016
by
Peter van 't Hof
Browse files
Remove comment
parent
19236e6f
Changes
1
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Inline
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public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/variantcallers/Freebayes.scala
View file @
c10bb10f
...
...
@@ -14,7 +14,6 @@ class Freebayes(val root: Configurable) extends Variantcaller {
val
fb
=
new
nl
.
lumc
.
sasc
.
biopet
.
extensions
.
Freebayes
(
this
)
fb
.
bamfiles
=
inputBams
.
values
.
toList
fb
.
outputVcf
=
new
File
(
outputDir
,
namePrefix
+
".freebayes.vcf"
)
//fb.isIntermediate = true
add
(
fb
|
new
Bgzip
(
this
)
>
outputFile
)
add
(
Tabix
.
apply
(
this
,
outputFile
))
...
...
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