Commits · ff8bbecb95d4daf8cc9415ecdc1b7ea75ac3e54e · Mirrors / biopet.biopet

Dec 29, 2015
- Style changes · ff8bbecb
  Peter van 't Hof authored 9 years ago
  
  ff8bbecb
- Remove unused lines · ea2bdb56
  Peter van 't Hof authored 9 years ago
  
  ea2bdb56
- Added count seqs · 3b55324c
  Peter van 't Hof authored 9 years ago
  
  3b55324c
- Added combine reads for GearsSingle · 03c15ef3
  Peter van 't Hof authored 9 years ago
  
  03c15ef3
- Init for mini pipeline for combining reads · ca7bba56
  Peter van 't Hof authored 9 years ago
  
  ca7bba56
- Moved flash as general job · b5c6727b
  Peter van 't Hof authored 9 years ago
  
  b5c6727b
Dec 26, 2015
- Fix summary jobs · b611f85e
  Peter van 't Hof authored 9 years ago
  
  b611f85e
Dec 25, 2015
- Added QC page to gears report · 4295a7bd
  Peter van 't Hof authored 9 years ago
  
  4295a7bd
- Added krona plot for cqiime closed to gears report · 3d39733e
  Peter van 't Hof authored 9 years ago
  
  3d39733e
- Added template for biom to krona · c8012021
  Peter van 't Hof authored 9 years ago
  
  c8012021
- Changes name · e133158f
  Peter van 't Hof authored 9 years ago
  
  e133158f
- Added merge output of qiimeClosed · 211b5e18
  Peter van 't Hof authored 9 years ago
  
  211b5e18
Dec 24, 2015
- Changed file names · 233d9a9b
  Peter van 't Hof authored 9 years ago
  
  233d9a9b
- Adding summary to qiime closed · 975ef9a2
  Peter van 't Hof authored 9 years ago
  
  975ef9a2
- Added multisample krona plot · e270ea9d
  Peter van 't Hof authored 9 years ago
  
  e270ea9d
- Switch to krona plots · 38e13cdd
  Peter van 't Hof authored 9 years ago
  
  38e13cdd
- Added krona web dependencies · dceac7c8
  Peter van 't Hof authored 9 years ago
  
  dceac7c8
- Added unclasified reads · d2025738
  Peter van 't Hof authored 9 years ago
  
  d2025738
- Add biom to krona method · 05bcfc19
  Peter van 't Hof authored 9 years ago
  
  05bcfc19
- Added whitespace · 30233a07
  Peter van 't Hof authored 9 years ago
  
  30233a07
Dec 23, 2015
- Added a prettyXmlPrinter · 3c5e4e88
  Peter van 't Hof authored 9 years ago
  
  3c5e4e88
- Added sorting for samples · 2b882e6f
  Peter van 't Hof authored 9 years ago
  
  2b882e6f
- Added function to convert kraken to krona output · 55b5629d
  Peter van 't Hof authored 9 years ago
  
  55b5629d
Dec 18, 2015
- Added tool for merging otu maps · 0b1fec3f
  Peter van 't Hof authored 9 years ago
  
  0b1fec3f
- Add settings · 86e7d090
  Peter van 't Hof authored 9 years ago
  
  86e7d090
- Fixed double flexiprep · 8acebe9a
  Peter van 't Hof authored 9 years ago
  
  8acebe9a
- Remove unneeded if statement · d7984e09
  Peter van 't Hof authored 9 years ago
  
  d7984e09
- Fixed sample and lib id for flexiprep · 5aa027a2
  Peter van 't Hof authored 9 years ago
  
  5aa027a2
- Fix sample IDs · 67db8906
  Peter van 't Hof authored 9 years ago
  
  67db8906
Dec 17, 2015
- Style fixes · 43100197
  Peter van 't Hof authored 9 years ago
  
  43100197
- Switch to sample based analysis · 08070144
  Peter van 't Hof authored 9 years ago
  
  08070144
- Fixed wrong job · c5669b7b
  Peter van 't Hof authored 9 years ago
  
  c5669b7b
- Removed unused import · 6e2abf91
  Peter van 't Hof authored 9 years ago
  
  6e2abf91
- Adding todo's · 7e27eee9
  Peter van 't Hof authored 9 years ago
  
  7e27eee9
- Added merge of otu tables and maps · 83c0d1ee
  Peter van 't Hof authored 9 years ago
  
  83c0d1ee
- Expose subpipelines · 0a25827e
  Peter van 't Hof authored 9 years ago
  
  0a25827e
- Added output files · 9c1384fb
  Peter van 't Hof authored 9 years ago
  
  9c1384fb
Dec 16, 2015
- Fixed outputdir · 4e8e65b2
  Peter van 't Hof authored 9 years ago
  
  4e8e65b2
- Removed unused import · 09ec3169
  Peter van 't Hof authored 9 years ago
  
  09ec3169
- Simplify modules · af8d9361
  Peter van 't Hof authored 9 years ago
  
  af8d9361