Commits · 6cadcab74e491c19edc6a53d5b4e51ac73d64d98 · Mirrors / biopet.biopet

Feb 26, 2015
- Fix add jobs to summary · 6cadcab7
  Peter van 't Hof authored 10 years ago
  
  6cadcab7
Feb 24, 2015
- Fix to redirect md5 to be write in the ouput dir · 359dcab8
  Peter van 't Hof authored 10 years ago
  
  359dcab8
- Fix to redirect md5 to be write in the ouput dir · e3ed0640
  Peter van 't Hof authored 10 years ago
  
  e3ed0640
- Fix imports · fd8d9ae0
  Peter van 't Hof authored 10 years ago
  
  fd8d9ae0
- Fix bowtie when doing paired end · 5a9c2878
  Peter van 't Hof authored 10 years ago
  
  5a9c2878
- change mfold arg parsing · a6ff7d86
  Sander van der Zeeuw authored 10 years ago
  
  a6ff7d86
Feb 23, 2015
- Remove old seqstat · 0f6b7f73
  Peter van 't Hof authored 10 years ago
  
  0f6b7f73
- Added new summary to new seqstat · 2809242f
  Peter van 't Hof authored 10 years ago
  
  2809242f
- Fix missing import · bd512b09
  Peter van 't Hof authored 10 years ago
  
  bd512b09
- Fixing seqstat usage of outDir · c1aee221
  Wai Yi Leung authored 10 years ago
  
  c1aee221
- Added mroe docs · 2b9639f8
  Peter van 't Hof authored 10 years ago
  
  2b9639f8
- Adde more docs · 4649de9a
  Peter van 't Hof authored 10 years ago
  
  4649de9a
- Saver get · b2ea7e52
  Peter van 't Hof authored 10 years ago
  
  b2ea7e52
- Change data to stats · 8f8b7e5e
  Peter van 't Hof authored 10 years ago
  
  8f8b7e5e
Feb 19, 2015
- Fix for #117 · 768b11d5
  Peter van 't Hof authored 10 years ago
  
  768b11d5
- Added some scaladocs · c6b47c6b
  Peter van 't Hof authored 10 years ago
  
  c6b47c6b
- Added scala docs · a531c9bf
  Peter van 't Hof authored 10 years ago
  
  a531c9bf
- Fix format · 1adebf9e
  Peter van 't Hof authored 10 years ago
  
  1adebf9e
- Added scala docs · 6fccbe6c
  Peter van 't Hof authored 10 years ago
  
  6fccbe6c
- Removing iml files · cde855df
  Sander Bollen authored 10 years ago
  
  cde855df
- Fixing expected info field test values · 3f85d3dc
  Sander Bollen authored 10 years ago
  
  3f85d3dc
- afterGraph was deprecated, now beforeGraph · a6e1f2bc
  Sander Bollen authored 10 years ago
  
  a6e1f2bc
- refactors · 3a8de40e
  Sander Bollen authored 10 years ago
  
  3a8de40e
- fixing missing cutadapt mock values · cb6f9998
  Sander Bollen authored 10 years ago
  
  cb6f9998
- Added scala docs · 358c598e
  Peter van 't Hof authored 10 years ago
  
  358c598e
- Added scala docs · e09f609a
  Peter van 't Hof authored 10 years ago
  
  e09f609a
- Explode and standard in one function, no longer custom exceptions, CSQ tag by default removed. · a5b9de0f
  Sander Bollen authored 10 years ago
  
  a5b9de0f
- Fix insertsize metrics · d28ac4f0
  Peter van 't Hof authored 10 years ago
  
  d28ac4f0
- Changed executables for summary · ea9fe977
  Peter van 't Hof authored 10 years ago
  
  ea9fe977
- Added Markduplicates to summary · a61296b2
  Peter van 't Hof authored 10 years ago
  
  a61296b2
Feb 18, 2015
- Remove version from summary and rename data to stats · d1016462
  Peter van 't Hof authored 10 years ago
  
  d1016462
- Rename data to settings · 73435d56
  Peter van 't Hof authored 10 years ago
  
  73435d56
- Fix picard summaries · eb8aef93
  Peter van 't Hof authored 10 years ago
  
  eb8aef93
- Fix outputDirs for samtools flagstat · 619ed38a
  Peter van 't Hof authored 10 years ago
  
  619ed38a
- Added some picard metrics to summary · a06e2726
  Peter van 't Hof authored 10 years ago
  
  a06e2726
Feb 17, 2015
- Fix cryptic pipeline errors caused by using directory as output files · e86f6183
  bow authored 10 years ago
  
  e86f6183
- Fix sickle in unit tests · df207f04
  Peter van 't Hof authored 10 years ago
  
  df207f04
- Move sickle summary methods to general sickle extension · d4564525
  Peter van 't Hof authored 10 years ago
  
  d4564525
- Remove unused imports · 78fe69d8
  Peter van 't Hof authored 10 years ago
  
  78fe69d8
- Moved summary methods to general cutadept · 02177ff7
  Peter van 't Hof authored 10 years ago
  
  02177ff7