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73435d56

Commit 73435d56 authored 10 years ago by Peter van 't Hof

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Rename data to settings

parent eb8aef93

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Changes 6

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protected/biopet-gatk-pipelines/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/GatkPipeline.scala 1 addition, 1 deletion

...ala/nl/lumc/sasc/biopet/pipelines/gatk/GatkPipeline.scala
public/bammetrics/src/main/scala/nl/lumc/sasc/biopet/pipelines/bammetrics/BamMetrics.scala 1 addition, 1 deletion

...nl/lumc/sasc/biopet/pipelines/bammetrics/BamMetrics.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/summary/SummaryQScript.scala 29 additions, 6 deletions

...ala/nl/lumc/sasc/biopet/core/summary/SummaryQScript.scala
public/carp/src/main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala 1 addition, 1 deletion

.../main/scala/nl/lumc/sasc/biopet/pipelines/carp/Carp.scala
public/flexiprep/src/main/scala/nl/lumc/sasc/biopet/pipelines/flexiprep/Flexiprep.scala 3 additions, 1 deletion

...a/nl/lumc/sasc/biopet/pipelines/flexiprep/Flexiprep.scala
public/mapping/src/main/scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala 1 addition, 1 deletion

...scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala

with 36 additions and 11 deletions

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