Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
B
biopet.biopet
Manage
Activity
Members
Code
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Container registry
Model registry
Operate
Environments
Analyze
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
GitLab community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
Mirrors
biopet.biopet
Commits
cde855df
Commit
cde855df
authored
Feb 19, 2015
by
Sander Bollen
Browse files
Options
Downloads
Patches
Plain Diff
Removing iml files
parent
3f85d3dc
Branches
Branches containing commit
Tags
Tags containing commit
No related merge requests found
Changes
2
Show whitespace changes
Inline
Side-by-side
Showing
2 changed files
public/toucan/Flexiprep.iml
+0
-92
0 additions, 92 deletions
public/toucan/Flexiprep.iml
public/toucan/Toucan.iml
+0
-92
0 additions, 92 deletions
public/toucan/Toucan.iml
with
0 additions
and
184 deletions
public/toucan/Flexiprep.iml
deleted
100644 → 0
+
0
−
92
View file @
3f85d3dc
<?xml version="1.0" encoding="UTF-8"?>
<module
org.jetbrains.idea.maven.project.MavenProjectsManager.isMavenModule=
"true"
type=
"JAVA_MODULE"
version=
"4"
>
<component
name=
"NewModuleRootManager"
inherit-compiler-output=
"false"
>
<output
url=
"file://$MODULE_DIR$/target/classes"
/>
<output-test
url=
"file://$MODULE_DIR$/target/test-classes"
/>
<content
url=
"file://$MODULE_DIR$"
>
<sourceFolder
url=
"file://$MODULE_DIR$/src/main/resources"
type=
"java-resource"
/>
<sourceFolder
url=
"file://$MODULE_DIR$/src/main/scala"
isTestSource=
"false"
/>
<excludeFolder
url=
"file://$MODULE_DIR$/target"
/>
</content>
<orderEntry
type=
"inheritedJdk"
/>
<orderEntry
type=
"sourceFolder"
forTests=
"false"
/>
<orderEntry
type=
"module"
module-name=
"BiopetFramework"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang:scala-library:2.11.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-queue:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-tools-public:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-engine:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang:scala-compiler:2.10.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang:scala-reflect:2.10.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: log4j:log4j:1.2.15"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: net.sf.jgrapht:jgrapht:0.8.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.commons:commons-email:1.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: javax.activation:activation:1.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: javax.mail:mail:1.4.4"
level=
"project"
/>
<orderEntry
type=
"module-library"
>
<library
name=
"Maven: com.sun:tools:1.4.2"
>
<CLASSES>
<root
url=
"jar:///usr/lib/jvm/java-1.7.0-openjdk-amd64/lib/tools.jar!/"
/>
</CLASSES>
<JAVADOC
/>
<SOURCES
/>
</library>
</orderEntry>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-queue-extensions-distribution:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-tools-protected:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: gov.nist.math:jama:1.0.2"
level=
"project"
/>
<orderEntry
type=
"library"
scope=
"RUNTIME"
name=
"Maven: org.broadinstitute.gatk:gatk-queue-extensions-generator:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-utils:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: samtools:htsjdk:1.120.1620"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.xerial.snappy:snappy-java:1.0.3-rc3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: picard:picard:1.120.1579"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.ant:ant:1.8.2"
level=
"project"
/>
<orderEntry
type=
"module-library"
>
<library
name=
"Maven: com.sun:tools.jar:1.5"
>
<CLASSES>
<root
url=
"jar:///usr/lib/jvm/java-1.7.0-openjdk-amd64/lib/tools.jar!/"
/>
</CLASSES>
<JAVADOC
/>
<SOURCES
/>
</library>
</orderEntry>
<orderEntry
type=
"library"
name=
"Maven: colt:colt:1.2.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: concurrent:concurrent:1.3.4"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: it.unimi.dsi:fastutil:6.5.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.simpleframework:simple-xml:2.0.4"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: stax:stax-api:1.0.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: stax:stax:1.2.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.reflections:reflections:0.9.9-RC1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.javassist:javassist:3.16.1-GA"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: dom4j:dom4j:1.6.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: xml-apis:xml-apis:1.0.b2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.slf4j:slf4j-log4j12:1.6.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.slf4j:slf4j-api:1.6.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.freemarker:freemarker:2.3.18"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.commons:commons-jexl:2.1.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-logging:commons-logging:1.1.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-lang:commons-lang:2.5"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-io:commons-io:2.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-collections:commons-collections:3.2.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.commons:commons-math:2.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: net.java.dev.jna:jna:3.2.7"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: net.java.dev.jets3t:jets3t:0.8.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-codec:commons-codec:1.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-httpclient:commons-httpclient:3.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.jamesmurty.utils:java-xmlbuilder:0.4"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: us.levk:drmaa-gridengine:6.2u5"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: us.levk:drmaa-common:1.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.google.code.gson:gson:2.2.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.httpcomponents:httpclient:4.1.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.httpcomponents:httpcore:4.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.google.code.cofoja:cofoja:1.0-r139"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: io.argonaut:argonaut_2.11:6.1-M4"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scalaz:scalaz-core_2.11:7.1.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang.modules:scala-parser-combinators_2.11:1.0.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang.modules:scala-xml_2.11:1.0.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.github.julien-truffaut:monocle-core_2.11:0.5.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.biojava:biojava3-core:3.1.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.biojava:biojava3-sequencing:3.1.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.google.guava:guava:18.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.github.scopt:scopt_2.10:3.2.0"
level=
"project"
/>
</component>
</module>
\ No newline at end of file
This diff is collapsed.
Click to expand it.
public/toucan/Toucan.iml
deleted
100644 → 0
+
0
−
92
View file @
3f85d3dc
<?xml version="1.0" encoding="UTF-8"?>
<module
org.jetbrains.idea.maven.project.MavenProjectsManager.isMavenModule=
"true"
type=
"JAVA_MODULE"
version=
"4"
>
<component
name=
"NewModuleRootManager"
inherit-compiler-output=
"false"
>
<output
url=
"file://$MODULE_DIR$/target/classes"
/>
<output-test
url=
"file://$MODULE_DIR$/target/test-classes"
/>
<content
url=
"file://$MODULE_DIR$"
>
<sourceFolder
url=
"file://$MODULE_DIR$/src/main/resources"
type=
"java-resource"
/>
<sourceFolder
url=
"file://$MODULE_DIR$/src/main/scala"
isTestSource=
"false"
/>
<excludeFolder
url=
"file://$MODULE_DIR$/target"
/>
</content>
<orderEntry
type=
"inheritedJdk"
/>
<orderEntry
type=
"sourceFolder"
forTests=
"false"
/>
<orderEntry
type=
"module"
module-name=
"BiopetFramework"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang:scala-library:2.11.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-queue:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-tools-public:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-engine:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang:scala-compiler:2.10.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang:scala-reflect:2.10.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: log4j:log4j:1.2.15"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: net.sf.jgrapht:jgrapht:0.8.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.commons:commons-email:1.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: javax.activation:activation:1.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: javax.mail:mail:1.4.4"
level=
"project"
/>
<orderEntry
type=
"module-library"
>
<library
name=
"Maven: com.sun:tools:1.4.2"
>
<CLASSES>
<root
url=
"jar:///usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar!/"
/>
</CLASSES>
<JAVADOC
/>
<SOURCES
/>
</library>
</orderEntry>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-queue-extensions-distribution:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-tools-protected:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: gov.nist.math:jama:1.0.2"
level=
"project"
/>
<orderEntry
type=
"library"
scope=
"RUNTIME"
name=
"Maven: org.broadinstitute.gatk:gatk-queue-extensions-generator:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.broadinstitute.gatk:gatk-utils:3.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: samtools:htsjdk:1.120.1620"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.xerial.snappy:snappy-java:1.0.3-rc3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: picard:picard:1.120.1579"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.ant:ant:1.8.2"
level=
"project"
/>
<orderEntry
type=
"module-library"
>
<library
name=
"Maven: com.sun:tools.jar:1.5"
>
<CLASSES>
<root
url=
"jar:///usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar!/"
/>
</CLASSES>
<JAVADOC
/>
<SOURCES
/>
</library>
</orderEntry>
<orderEntry
type=
"library"
name=
"Maven: colt:colt:1.2.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: concurrent:concurrent:1.3.4"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: it.unimi.dsi:fastutil:6.5.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.simpleframework:simple-xml:2.0.4"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: stax:stax-api:1.0.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: stax:stax:1.2.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.reflections:reflections:0.9.9-RC1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.javassist:javassist:3.16.1-GA"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: dom4j:dom4j:1.6.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: xml-apis:xml-apis:1.0.b2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.slf4j:slf4j-log4j12:1.6.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.slf4j:slf4j-api:1.6.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.freemarker:freemarker:2.3.18"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.commons:commons-jexl:2.1.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-logging:commons-logging:1.1.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-lang:commons-lang:2.5"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-io:commons-io:2.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-collections:commons-collections:3.2.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.commons:commons-math:2.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: net.java.dev.jna:jna:3.2.7"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: net.java.dev.jets3t:jets3t:0.8.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-codec:commons-codec:1.3"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: commons-httpclient:commons-httpclient:3.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.jamesmurty.utils:java-xmlbuilder:0.4"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: us.levk:drmaa-gridengine:6.2u5"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: us.levk:drmaa-common:1.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.google.code.gson:gson:2.2.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.httpcomponents:httpclient:4.1.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.apache.httpcomponents:httpcore:4.1"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.google.code.cofoja:cofoja:1.0-r139"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: io.argonaut:argonaut_2.11:6.1-M4"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scalaz:scalaz-core_2.11:7.1.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang.modules:scala-parser-combinators_2.11:1.0.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.scala-lang.modules:scala-xml_2.11:1.0.2"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.github.julien-truffaut:monocle-core_2.11:0.5.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.biojava:biojava3-core:3.1.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: org.biojava:biojava3-sequencing:3.1.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.google.guava:guava:18.0"
level=
"project"
/>
<orderEntry
type=
"library"
name=
"Maven: com.github.scopt:scopt_2.10:3.2.0"
level=
"project"
/>
</component>
</module>
\ No newline at end of file
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
sign in
to comment