Commits · 211b5e1891986efb55cc66d6b20bff2f268a6aa3 · Mirrors / biopet.biopet

25 Dec, 2015 1 commit
- Added merge output of qiimeClosed · 211b5e18
  Peter van 't Hof authored Dec 25, 2015
  
  211b5e18
24 Dec, 2015 8 commits
- Changed file names · 233d9a9b
  Peter van 't Hof authored Dec 24, 2015
  
  233d9a9b
- Adding summary to qiime closed · 975ef9a2
  Peter van 't Hof authored Dec 24, 2015
  
  975ef9a2
- Added multisample krona plot · e270ea9d
  Peter van 't Hof authored Dec 24, 2015
  
  e270ea9d
- Switch to krona plots · 38e13cdd
  Peter van 't Hof authored Dec 24, 2015
  
  38e13cdd
- Added krona web dependencies · dceac7c8
  Peter van 't Hof authored Dec 24, 2015
  
  dceac7c8
- Added unclasified reads · d2025738
  Peter van 't Hof authored Dec 24, 2015
  
  d2025738
- Add biom to krona method · 05bcfc19
  Peter van 't Hof authored Dec 24, 2015
  
  05bcfc19
- Added whitespace · 30233a07
  Peter van 't Hof authored Dec 24, 2015
  
  30233a07
23 Dec, 2015 3 commits
- Added a prettyXmlPrinter · 3c5e4e88
  Peter van 't Hof authored Dec 23, 2015
  
  3c5e4e88
- Added sorting for samples · 2b882e6f
  Peter van 't Hof authored Dec 23, 2015
  
  2b882e6f
- Added function to convert kraken to krona output · 55b5629d
  Peter van 't Hof authored Dec 23, 2015
  
  55b5629d
18 Dec, 2015 7 commits
- Added tool for merging otu maps · 0b1fec3f
  Peter van 't Hof authored Dec 18, 2015
  
  0b1fec3f
- Added properties for debuging · d6694b38
  Peter van 't Hof authored Dec 18, 2015
  
  d6694b38
- Add settings · 86e7d090
  Peter van 't Hof authored Dec 18, 2015
  
  86e7d090
- Fixed double flexiprep · 8acebe9a
  Peter van 't Hof authored Dec 18, 2015
  
  8acebe9a
- Remove unneeded if statement · d7984e09
  Peter van 't Hof authored Dec 18, 2015
  
  d7984e09
- Fixed sample and lib id for flexiprep · 5aa027a2
  Peter van 't Hof authored Dec 18, 2015
  
  5aa027a2
- Fix sample IDs · 67db8906
  Peter van 't Hof authored Dec 18, 2015
  
  67db8906
17 Dec, 2015 11 commits
- Style fixes · 43100197
  Peter van 't Hof authored Dec 17, 2015
  
  43100197
- Switch to sample based analysis · 08070144
  Peter van 't Hof authored Dec 17, 2015
  
  08070144
- Fixed wrong job · c5669b7b
  Peter van 't Hof authored Dec 17, 2015
  
  c5669b7b
- Removed unused import · 6e2abf91
  Peter van 't Hof authored Dec 17, 2015
  
  6e2abf91
- Raise memory · 16e4e0cb
  Peter van 't Hof authored Dec 17, 2015
  
  16e4e0cb
- Adding todo's · 7e27eee9
  Peter van 't Hof authored Dec 17, 2015
  
  7e27eee9
- Added merge of otu tables and maps · 83c0d1ee
  Peter van 't Hof authored Dec 17, 2015
  
  83c0d1ee
- Expose subpipelines · 0a25827e
  Peter van 't Hof authored Dec 17, 2015
  
  0a25827e
- Added output files · 9c1384fb
  Peter van 't Hof authored Dec 17, 2015
  
  9c1384fb
- Added output files · f430f58c
  Peter van 't Hof authored Dec 17, 2015
  
  f430f58c
- Added extension for merge otu maps · 6f21013e
  Peter van 't Hof authored Dec 17, 2015
  
  6f21013e
16 Dec, 2015 10 commits
- Added extension for merge otu tables · 9698cb6d
  Peter van 't Hof authored Dec 16, 2015
  
  9698cb6d
- Raise default memory · e910b28a
  Peter van 't Hof authored Dec 16, 2015
  
  e910b28a
- Always use -f · 8fd9b095
  Peter van 't Hof authored Dec 16, 2015
  
  8fd9b095
- Style changes · a952ee2a
  Peter van 't Hof authored Dec 16, 2015
  
  a952ee2a
- Fixed outputdir · 4e8e65b2
  Peter van 't Hof authored Dec 16, 2015
  
  4e8e65b2
- Removed unused import · 09ec3169
  Peter van 't Hof authored Dec 16, 2015
  
  09ec3169
- Simplify modules · af8d9361
  Peter van 't Hof authored Dec 16, 2015
  
  af8d9361
- Merge remote-tracking branch 'remotes/origin/develop' into feature-qiime · 5c344be9
  Peter van 't Hof authored Dec 16, 2015
  
  5c344be9
- Added closed reference method · c6a89d92
  Peter van 't Hof authored Dec 16, 2015
  
  c6a89d92
- Added extension for clased reference otu picking · 15cd85a4
  Peter van 't Hof authored Dec 16, 2015
  
  15cd85a4