Commits · c7b928d34ff9772848da6620225893c2b225d64f · Mirrors / biopet.biopet

Jul 03, 2015
- Fix code style warnings · c7b928d3
  Peter van 't Hof authored 9 years ago
  
  c7b928d3
- Fix code style warnings · 2c323f38
  Peter van 't Hof authored 9 years ago
  
  2c323f38
Jul 01, 2015
- Optimize imports · 9812237c
  Peter van 't Hof authored 9 years ago
  
  9812237c
- Front page texts for report · 8282c888
  Sander Bollen authored 9 years ago
  
  8282c888
Jun 25, 2015
- Remove test code · da1f145f
  Peter van 't Hof authored 9 years ago
  
  da1f145f
- Fix pipeline name · 40ab635e
  Peter van 't Hof authored 9 years ago
  
  40ab635e
- Adding metrics step on merged bam file · 3a1bd525
  Peter van 't Hof authored 9 years ago
  
  3a1bd525
- adding carp report to the pipeline · d030c0bf
  Peter van 't Hof authored 9 years ago
  
  d030c0bf
- Fixed file name · d091609d
  Peter van 't Hof authored 9 years ago
  
  d091609d
- Adding carp report · 2b3901cb
  Peter van 't Hof authored 9 years ago
  
  2b3901cb
- Bump version to 0.3.2 · b77d7b4c
  bow authored 9 years ago
  
  View commits for tag v0.3.2 v0.3.2
  
  b77d7b4c
Jun 22, 2015
- Change bwa to bwa-mem · 06cf90cb
  Peter van 't Hof authored 9 years ago
  
  06cf90cb
Jun 21, 2015
- Added executables that are missing on a native osx install · dca682a1
  Peter van 't Hof authored 9 years ago
  
  dca682a1
Apr 06, 2015
- Adding reference stats to summary · a6e3dbc8
  Peter van 't Hof authored 10 years ago
  
  a6e3dbc8
- Change naming · ba931103
  Peter van 't Hof authored 10 years ago
  
  ba931103
- Switch pipeline to reference module · 1eada82e
  Peter van 't Hof authored 10 years ago
  
  1eada82e
Mar 26, 2015
- Switch to scala 2.10 · 3dc3aad4
  Peter van 't Hof authored 10 years ago
  
  3dc3aad4
Mar 19, 2015
- Bump version from 0.3.0 to 0.3.1 · d2efef6d
  Wai Yi Leung authored 10 years ago
  
  d2efef6d
Mar 17, 2015
- Bump version to 0.4.0-DEV · 5bd4ef22
  bow authored 10 years ago
  
  5bd4ef22
Mar 13, 2015
- Bump version to 0.3.0 · c5e27ef2
  bow authored 10 years ago
  
  c5e27ef2
Mar 11, 2015
- Add more descriptive error message in Carp when sample is called control · 675718da
  bow authored 10 years ago
  
  675718da
- Update licenses · 3ec60672
  bow authored 10 years ago
  
  3ec60672
- Bump version to 0.3.0-RC1 · a289c540
  bow authored 10 years ago
  
  a289c540
Mar 05, 2015
- global summary file added · 9bd7f8f2
  Sander van der Zeeuw authored 10 years ago
  
  9bd7f8f2
Mar 04, 2015
- changes in output folder of MACS single sample runs · 09103695
  Sander van der Zeeuw authored 10 years ago
  
  09103695
Feb 27, 2015
- Add todo's · e3b3e129
  Peter van 't Hof authored 10 years ago
  
  e3b3e129
- Make samples and libraries Summarizable · 21182480
  Peter van 't Hof authored 10 years ago
  
  21182480
Feb 26, 2015
- Disable parallel tests · be0ef827
  Peter van 't Hof authored 10 years ago
  
  be0ef827
Feb 19, 2015
- fixing missing cutadapt mock values · cb6f9998
  Sander Bollen authored 10 years ago
  
  cb6f9998
Feb 18, 2015
- Rename data to settings · 73435d56
  Peter van 't Hof authored 10 years ago
  
  73435d56
Feb 16, 2015
- Add summary framework to Carp · 2404e328
  Peter van 't Hof authored 10 years ago
  
  2404e328
- Added summary framework to mapping and flexiprep · 0c3deab9
  Peter van 't Hof authored 10 years ago
  
  0c3deab9
- Adding Seqstat to the pipeline tests · 306e857d
  Wai Yi Leung authored 10 years ago
  
  306e857d
- Use unique and transient temp directory for each pipeline test · 280f922d
  bow authored 10 years ago
  
  280f922d
Feb 14, 2015
- Added missing executables · 2afb277b
  Peter van 't Hof authored 10 years ago
  
  2afb277b
- Fix dependencies · 1926c8f8
  Peter van 't Hof authored 10 years ago
  
  1926c8f8
Feb 13, 2015
- Add job check to unit tests · b7c5a56c
  Peter van 't Hof authored 10 years ago
  
  b7c5a56c
- Intial unit test for Carp · 4b011fa8
  Peter van 't Hof authored 10 years ago
  
  4b011fa8
- Added default aligner · 3e1bc47a
  Peter van 't Hof authored 10 years ago
  
  3e1bc47a
- Added test log4j.properties · 64397750
  Peter van 't Hof authored 10 years ago
  
  64397750