Skip to content

GitLab

Explore

Sign in

Primary navigation

Project

B

biopet.biopet
- Activity
- Members
- Environments

Snippets Groups Projects

ba931103

Commit ba931103 authored 10 years ago by Peter van 't Hof

Downloads
- Patches
- Plain Diff

Change naming

parent 1eada82e

No related branches found

No related tags found

Loading

Changes 10

Hide whitespace changes

Inline Side-by-side

Showing

protected/biopet-gatk-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/gatk/broad/GatkGeneral.scala 3 additions, 3 deletions

.../lumc/sasc/biopet/extensions/gatk/broad/GatkGeneral.scala
protected/biopet-gatk-pipelines/src/test/scala/nl/lumc/sasc/biopet/pipelines/gatk/ShivaTest.scala 1 addition, 1 deletion

.../scala/nl/lumc/sasc/biopet/pipelines/gatk/ShivaTest.scala
protected/biopet-gatk-pipelines/src/test/scala/nl/lumc/sasc/biopet/pipelines/gatk/ShivaVariantcallingTest.scala 14 additions, 2 deletions

.../sasc/biopet/pipelines/gatk/ShivaVariantcallingTest.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/Reference.scala 18 additions, 9 deletions

...k/src/main/scala/nl/lumc/sasc/biopet/core/Reference.scala
public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/extensions/gatk/Gatk.scala 3 additions, 3 deletions

...main/scala/nl/lumc/sasc/biopet/extensions/gatk/Gatk.scala
public/carp/src/test/scala/nl/lumc/sasc/biopet/pipelines/carp/CarpTest.scala 1 addition, 1 deletion

...t/scala/nl/lumc/sasc/biopet/pipelines/carp/CarpTest.scala
public/mapping/src/test/scala/nl/lumc/sasc/biopet/pipelines/mapping/MappingTest.scala 1 addition, 1 deletion

...a/nl/lumc/sasc/biopet/pipelines/mapping/MappingTest.scala
public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaVariantcallingTrait.scala 2 additions, 2 deletions

...asc/biopet/pipelines/shiva/ShivaVariantcallingTrait.scala
public/shiva/src/test/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTest.scala 1 addition, 1 deletion

...scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTest.scala
public/shiva/src/test/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaVariantcallingTest.scala 14 additions, 2 deletions

...sasc/biopet/pipelines/shiva/ShivaVariantcallingTest.scala

with 58 additions and 25 deletions

Loading

0% Loading or .

You are about to add 0 people to the discussion. Proceed with caution.

Finish editing this message first!

Please register or sign in to comment