Commits · 67d911cd8f1d8c4c6721063111f3b141176572ee · Mirrors / biopet.biopet

Jul 27, 2015
- Bumb version 0.4.0-RC1 · 5224df5b
  Peter van 't Hof authored 9 years ago
  
  View commits for tag v0.4.0-RC1 v0.4.0-RC1
  
  5224df5b
Jun 25, 2015
- Bump version to 0.3.2 · b77d7b4c
  bow authored 9 years ago
  
  View commits for tag v0.3.2 v0.3.2
  
  b77d7b4c
Mar 19, 2015
- Bump version from 0.3.0 to 0.3.1 · d2efef6d
  Wai Yi Leung authored 10 years ago
  
  d2efef6d
Mar 17, 2015
- Bump version to 0.4.0-DEV · 5bd4ef22
  bow authored 10 years ago
  
  5bd4ef22
Mar 13, 2015
- Bump version to 0.3.0 · c5e27ef2
  bow authored 10 years ago
  
  c5e27ef2
Mar 11, 2015
- Bump version to 0.3.0-RC1 · a289c540
  bow authored 10 years ago
  
  a289c540
Mar 07, 2015
- Remove aggregated scoverage module · 31058345
  Peter van 't Hof authored 10 years ago
  
  31058345
Feb 23, 2015
- Added test code coverage plugin · 9e012015
  Peter van 't Hof authored 10 years ago
  
  9e012015
Dec 09, 2014
- Change pom version · 06536548
  Peter van 't Hof authored 10 years ago
  
  06536548
- Change Pom to version 0.2.0 · 1572cb02
  Peter van 't Hof authored 10 years ago
  
  1572cb02
Dec 04, 2014
- Change pom to version 0.2.0-rc1 · 203b60cc
  Peter van 't Hof authored 10 years ago
  
  203b60cc
Nov 25, 2014
- Public is now the independent · f956b6fc
  Peter van 't Hof authored 10 years ago
  
  f956b6fc
Nov 24, 2014
- Moved scripts to resources · 82d03176
  Peter van 't Hof authored 10 years ago
  
  82d03176
- now works with parent poms · e07befed
  Peter van 't Hof authored 10 years ago
  
  e07befed
- Change names · e51c2232
  Peter van 't Hof authored 10 years ago
  
  e51c2232
Nov 22, 2014
- Move BiopetFramework to public maven project · 7d730675
  Peter van 't Hof authored 10 years ago
  
  7d730675
Oct 30, 2014
- Sync main pom.xml version · 413f9bda
  bow authored 10 years ago
  
  413f9bda
- prettify pom.xml · 4cc2d991
  bow authored 10 years ago
  
  4cc2d991
Aug 25, 2014

Peter van 't Hof authored 10 years ago

Conflicts:
	flexiprep/nbactions.xml
	gatk/gatk-pipeline/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/GatkPipeline.scala
	gatk/gatk-variantcalling/src/main/scala/nl/lumc/sasc/biopet/pipelines/gatk/GatkVariantcalling.scala
	mapping/examples/test.json
	mapping/nbactions.xml
	pom.xml

4557807c

Merge all maven packages into 1 · 7624b929
Peter van 't Hof authored 10 years ago

7624b929
Added BiopetPackage as complete package · 4f6ea975
Peter van 't Hof authored 10 years ago

4f6ea975

Jul 29, 2014
- Initial checkin for Gentrap · 1a6df3ca
  bow authored 10 years ago
  
  1a6df3ca
Jul 21, 2014
- Collected all gatk pipelines/artifacts into 1 maven project · 79435a29
  Peter van 't Hof authored 10 years ago
  
  79435a29
Jul 18, 2014
- Added 2 modules · 9be6e744
  Peter van 't Hof authored 10 years ago
  
  9be6e744
Jul 15, 2014
- Update to Queue/GATK 3.2 · 0a33b3d3
  Peter van 't Hof authored 10 years ago
  
  0a33b3d3
- Added gatk-variantcalling module · 0d280a78
  Peter van 't Hof authored 10 years ago
  
  0d280a78
Jun 27, 2014
- Added pipeline template · 102d3f50
  Peter van 't Hof authored 10 years ago
  
  102d3f50
Jun 23, 2014
- pom changes for start of 0.1.3 · 9e9e6022
  Peter van 't Hof authored 10 years ago
  
  9e9e6022
Jun 19, 2014
- Packaging changed, no scala compiler anymore in jar · 27de6356
  Peter van 't Hof authored 10 years ago
  
  27de6356
Jun 17, 2014
- version changes · f0705ac8
  Peter van 't Hof authored 10 years ago
  
  removing source files from jar packaging
  f0705ac8
May 20, 2014

- Added wrapper for Star · ca2905e5

Peter van 't Hof authored 10 years ago

- Added a mapping module (not yet used in Gatk)
- Added VariantRecalibrator to Gatk

ca2905e5

May 14, 2014
- fixed pom.xml · 08e40349
  Peter van 't Hof authored 10 years ago
  
  08e40349
- Added gatk package · c548969b
  Peter van 't Hof authored 10 years ago
  
  c548969b
- First commit · d7457fe8
  pjvan_thof authored 10 years ago
  
  d7457fe8