Moved scripts to resources

pom.xml

.../lumc/sasc/biopet/extensions/svcallers/breakdancer2vcf.py

...esources/nl/lumc/sasc/biopet/pipelines/gatk/plotHeatmap.R

...c/sasc/biopet/pipelines/gentrap/scripts/aggr_base_count.R

.../nl/lumc/sasc/biopet/pipelines/gentrap/scripts/bam_rna.py

.../nl/lumc/sasc/biopet/pipelines/gentrap/scripts/gc_dist.py

...lumc/sasc/biopet/pipelines/gentrap/scripts/insert_dist.py

...mc/sasc/biopet/pipelines/gentrap/scripts/parse_cuffcmp.py

.../lumc/sasc/biopet/pipelines/gentrap/scripts/pdf_report.py

...lumc/sasc/biopet/pipelines/gentrap/scripts/rna_metrics.py

.../main/resources/nl/lumc/sasc/biopet/scripts/bed_squish.py

...sources/nl/lumc/sasc/biopet/scripts/bedtools_cov_stats.py

...in/resources/nl/lumc/sasc/biopet/scripts/fastqc_contam.py

...main/resources/nl/lumc/sasc/biopet/scripts/prefixFastq.py

...esources/nl/lumc/sasc/biopet/scripts/pyfastqc/__init__.py

...rces/nl/lumc/sasc/biopet/scripts/sync_paired_end_reads.py

...urces/org/broadinstitute/gatk/queue/util/queueJobReport.R