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biopet.biopet
Commits
f956b6fc
Commit
f956b6fc
authored
Nov 25, 2014
by
Peter van 't Hof
Browse files
Public is now the independent
parent
82d03176
Changes
2
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pom.xml
View file @
f956b6fc
...
...
@@ -2,109 +2,19 @@
<project
xmlns=
"http://maven.apache.org/POM/4.0.0"
xmlns:xsi=
"http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation=
"http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd"
>
<modelVersion>
4.0.0
</modelVersion>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
BiopetRoot
</artifactId>
<version>
0.2.0-DEV
</version>
<packaging>
pom
</packaging>
<name>
BiopetRoot
</name>
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
Biopet
</artifactId>
<version>
0.2.0-DEV
</version>
<relativePath>
public
</relativePath>
</parent>
<modules>
<module>
public
</module>
<module>
protected
</module>
</modules>
<properties>
<project.build.sourceEncoding>
UTF-8
</project.build.sourceEncoding>
</properties>
<build>
<resources>
<resource>
<directory>
src/main/resources
</directory>
<includes>
<include>
**/*
</include>
</includes>
</resource>
</resources>
<plugins>
<plugin>
<groupId>
org.scala-tools
</groupId>
<artifactId>
maven-scala-plugin
</artifactId>
<version>
2.15.2
</version>
<executions>
<execution>
<id>
scala-compile
</id>
<goals>
<goal>
compile
</goal>
<goal>
testCompile
</goal>
</goals>
<configuration>
<args>
<arg>
-dependencyfile
</arg>
<arg>
${project.build.directory}/.scala_dependencies
</arg>
<arg>
-deprecation
</arg>
<arg>
-feature
</arg>
</args>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>
org.apache.maven.plugins
</groupId>
<artifactId>
maven-jar-plugin
</artifactId>
<version>
2.5
</version>
<configuration>
<archive>
<manifest>
<addDefaultImplementationEntries>
true
</addDefaultImplementationEntries>
<addDefaultSpecificationEntries>
true
</addDefaultSpecificationEntries>
</manifest>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>
org.apache.maven.plugins
</groupId>
<artifactId>
maven-compiler-plugin
</artifactId>
<version>
2.3.2
</version>
<configuration>
<showDeprecation>
true
</showDeprecation>
</configuration>
</plugin>
<plugin>
<groupId>
org.scalariform
</groupId>
<artifactId>
scalariform-maven-plugin
</artifactId>
<version>
0.1.4
</version>
<executions>
<execution>
<phase>
process-sources
</phase>
<goals>
<goal>
format
</goal>
</goals>
<configuration>
<rewriteArrowSymbols>
false
</rewriteArrowSymbols>
<alignParameters>
true
</alignParameters>
<alignSingleLineCaseStatements_maxArrowIndent>
40
</alignSingleLineCaseStatements_maxArrowIndent>
<alignSingleLineCaseStatements>
true
</alignSingleLineCaseStatements>
<compactStringConcatenation>
false
</compactStringConcatenation>
<compactControlReadability>
false
</compactControlReadability>
<doubleIndentClassDeclaration>
false
</doubleIndentClassDeclaration>
<formatXml>
true
</formatXml>
<indentLocalDefs>
false
</indentLocalDefs>
<indentPackageBlocks>
true
</indentPackageBlocks>
<indentSpaces>
2
</indentSpaces>
<placeScaladocAsterisksBeneathSecondAsterisk>
false
</placeScaladocAsterisksBeneathSecondAsterisk>
<preserveDanglingCloseParenthesis>
true
</preserveDanglingCloseParenthesis>
<preserveSpaceBeforeArguments>
false
</preserveSpaceBeforeArguments>
<rewriteArrowSymbols>
false
</rewriteArrowSymbols>
<spaceBeforeColon>
false
</spaceBeforeColon>
<spaceInsideBrackets>
false
</spaceInsideBrackets>
<spaceInsideParentheses>
false
</spaceInsideParentheses>
<spacesWithinPatternBinders>
true
</spacesWithinPatternBinders>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
</project>
public/pom.xml
View file @
f956b6fc
...
...
@@ -2,14 +2,11 @@
<project
xmlns=
"http://maven.apache.org/POM/4.0.0"
xmlns:xsi=
"http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation=
"http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd"
>
<modelVersion>
4.0.0
</modelVersion>
<artifactId>
Biopet
</artifactId>
<groupId>
nl.lumc.sasc
</groupId>
<name>
Biopet
</name>
<packaging>
pom
</packaging>
<parent>
<groupId>
nl.lumc.sasc
</groupId>
<artifactId>
BiopetRoot
</artifactId>
<version>
0.2.0-DEV
</version>
<relativePath>
../
</relativePath>
</parent>
<version>
0.2.0-DEV
</version>
<modules>
<module>
biopet-framework
</module>
<module>
biopet-public-package
</module>
...
...
@@ -20,4 +17,133 @@
<module>
sage
</module>
<module>
yamsvp
</module>
</modules>
<properties>
<project.build.sourceEncoding>
UTF-8
</project.build.sourceEncoding>
</properties>
<build>
<resources>
<resource>
<directory>
src/main/resources
</directory>
<includes>
<include>
**/*
</include>
</includes>
</resource>
</resources>
<plugins>
<plugin>
<groupId>
org.scala-tools
</groupId>
<artifactId>
maven-scala-plugin
</artifactId>
<version>
2.15.2
</version>
<executions>
<execution>
<id>
scala-compile
</id>
<goals>
<goal>
compile
</goal>
<goal>
testCompile
</goal>
</goals>
<configuration>
<args>
<arg>
-dependencyfile
</arg>
<arg>
${project.build.directory}/.scala_dependencies
</arg>
<arg>
-deprecation
</arg>
<arg>
-feature
</arg>
</args>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>
org.apache.maven.plugins
</groupId>
<artifactId>
maven-jar-plugin
</artifactId>
<version>
2.5
</version>
<configuration>
<archive>
<manifest>
<addDefaultImplementationEntries>
true
</addDefaultImplementationEntries>
<addDefaultSpecificationEntries>
true
</addDefaultSpecificationEntries>
</manifest>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>
org.apache.maven.plugins
</groupId>
<artifactId>
maven-compiler-plugin
</artifactId>
<version>
2.3.2
</version>
<configuration>
<showDeprecation>
true
</showDeprecation>
</configuration>
</plugin>
<plugin>
<groupId>
org.scalariform
</groupId>
<artifactId>
scalariform-maven-plugin
</artifactId>
<version>
0.1.4
</version>
<executions>
<execution>
<phase>
process-sources
</phase>
<goals>
<goal>
format
</goal>
</goals>
<configuration>
<rewriteArrowSymbols>
false
</rewriteArrowSymbols>
<alignParameters>
true
</alignParameters>
<alignSingleLineCaseStatements_maxArrowIndent>
40
</alignSingleLineCaseStatements_maxArrowIndent>
<alignSingleLineCaseStatements>
true
</alignSingleLineCaseStatements>
<compactStringConcatenation>
false
</compactStringConcatenation>
<compactControlReadability>
false
</compactControlReadability>
<doubleIndentClassDeclaration>
false
</doubleIndentClassDeclaration>
<formatXml>
true
</formatXml>
<indentLocalDefs>
false
</indentLocalDefs>
<indentPackageBlocks>
true
</indentPackageBlocks>
<indentSpaces>
2
</indentSpaces>
<placeScaladocAsterisksBeneathSecondAsterisk>
false
</placeScaladocAsterisksBeneathSecondAsterisk>
<preserveDanglingCloseParenthesis>
true
</preserveDanglingCloseParenthesis>
<preserveSpaceBeforeArguments>
false
</preserveSpaceBeforeArguments>
<rewriteArrowSymbols>
false
</rewriteArrowSymbols>
<spaceBeforeColon>
false
</spaceBeforeColon>
<spaceInsideBrackets>
false
</spaceInsideBrackets>
<spaceInsideParentheses>
false
</spaceInsideParentheses>
<spacesWithinPatternBinders>
true
</spacesWithinPatternBinders>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>
pl.project13.maven
</groupId>
<artifactId>
git-commit-id-plugin
</artifactId>
<version>
2.1.10
</version>
<executions>
<execution>
<goals>
<goal>
revision
</goal>
</goals>
</execution>
</executions>
<configuration>
<prefix>
git
</prefix>
<dateFormat>
dd.MM.yyyy '@' HH:mm:ss z
</dateFormat>
<verbose>
false
</verbose>
<useNativeGit>
true
</useNativeGit>
<skipPoms>
false
</skipPoms>
<generateGitPropertiesFile>
true
</generateGitPropertiesFile>
<generateGitPropertiesFilename>
src/main/resources/git.properties
</generateGitPropertiesFilename>
<failOnNoGitDirectory>
false
</failOnNoGitDirectory>
<abbrevLength>
7
</abbrevLength>
<skip>
false
</skip>
<excludeProperties></excludeProperties>
<gitDescribe>
<skip>
false
</skip>
<always>
false
</always>
<abbrev>
7
</abbrev>
<dirty>
-dirty
</dirty>
<forceLongFormat>
false
</forceLongFormat>
</gitDescribe>
</configuration>
</plugin>
</plugins>
</build>
</project>
\ No newline at end of file
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