now works with parent poms

.gitignore

pom.xml

protected/basty/pom.xml

protected/biopet-gatk-extensions/pom.xml

protected/biopet-gatk-pipelines/pom.xml

protected/biopet-protected-package/pom.xml

.../nl/lumc/sasc/biopet/core/BiopetExecutableProtected.scala

protected/pom.xml

public/bammetrics/pom.xml

public/biopet-framework/pom.xml

public/biopet-public-package/pom.xml

public/flexiprep/pom.xml

public/gentrap/pom.xml

public/mapping/pom.xml

public/pom.xml

public/sage/pom.xml

public/yamsvp/pom.xml