Commits · 5cb91703fb777ae35bcf6e509f7e124643339891 · biowdl / tasks

Jul 21, 2021
- update CHANGELOG · 5cb91703
  cagaser authored 3 years ago
  
  5cb91703
Jul 20, 2021
- small fix · 67c69d4e
  cagaser authored 3 years ago
  
  67c69d4e
- update samtools.wdl somaticseq.wdl: add memory runtime · c9c36cf8
  cagaser authored 3 years ago
  
  c9c36cf8
Jul 07, 2021
- Merge pull request #288 from biowdl/release-5.0.0 · 3a01f3b4
  Cedrick Agaser authored 3 years ago
  
  Release 5.0.0
  View commits for tag v5.0.0 v5.0.0 Unverified
  
  3a01f3b4
- update CI.yml · a411311e
  cagaser authored 3 years ago
  
  a411311e
- Change current development version in CHANGELOG.md to stable version · ff2b1efb
  cagaser authored 3 years ago
  
  ff2b1efb
- update submodule scripts · a40300a4
  cagaser authored 3 years ago
  
  a40300a4
Jul 05, 2021
- Merge pull request #283 from biowdl/rhpvorderman-patch-1 · 41e1e078
  Ruben Vorderman authored 3 years ago
  
  Set defaults for boolean values
  Unverified
  
  41e1e078
- Merge branch 'develop' into rhpvorderman-patch-1 · a2655eb2
  Ruben Vorderman authored 3 years ago
  
  Unverified
  
  a2655eb2
Jul 02, 2021
- small formatting fix · 4e0ab25e
  Cats authored 3 years ago
  
  4e0ab25e
- Update spades.wdl · f3ac5431
  Ruben Vorderman authored 3 years ago
  
  Co-authored-by: Davy Cats <davycats.dc@gmail.com>
  Unverified
  
  f3ac5431
Jun 30, 2021
- fix cpat dockerimage · 8eb01349
  Cats authored 3 years ago
  
  8eb01349
- Merge pull request #285 from biowdl/update_CPAT · faa8c93f
  Cats authored 3 years ago
  
  Update CPAT to version 3.0.4
  Unverified
  
  faa8c93f
- fix mkdir in CPAT · d4d36e02
  Cats authored 3 years ago
  
  d4d36e02
- Merge remote-tracking branch 'origin/develop' into update_CPAT · 8c7f9978
  Cats authored 3 years ago
  
  8c7f9978
- update CPAT to 3.0.4 · 47c89884
  Cats authored 3 years ago
  
  47c89884
Jun 28, 2021
- Merge pull request #284 from biowdl/task_issue_281 · c1a647aa
  Cedrick Agaser authored 3 years ago
  
  Task issue 281
  Unverified
  
  c1a647aa
- update CHANGELOG · da28f939
  cagaser authored 3 years ago
  
  da28f939
- survivor: line 47-49, change integer to string literal · 2ebde5f0
  cagaser authored 3 years ago
  
  2ebde5f0
Jun 25, 2021
- Set defaults for boolean values · 5e29a653
  Ruben Vorderman authored 3 years ago
  
  Unverified
  
  5e29a653
Jun 15, 2021
- Merge pull request #280 from biowdl/PACBIO · c210b6cf
  Jasper authored 3 years ago
  
  Try to adjust localization.
  Unverified
  
  c210b6cf
- Add directory creation to samtools fastq. · f2f7411a
  JasperBoom authored 3 years ago
  
  f2f7411a
- Revert changes to WDL file. · 235fb43f
  JasperBoom authored 3 years ago
  
  235fb43f
Jun 14, 2021
- Try another approach. · 734c4037
  JasperBoom authored 3 years ago
  
  734c4037
- Fix array. · adee85e2
  JasperBoom authored 3 years ago
  
  adee85e2
- Test tool without localization. · adad218b
  JasperBoom authored 3 years ago
  
  adad218b
- Merge branch 'PACBIO' of github.com:biowdl/tasks into PACBIO · e034874e
  JasperBoom authored 3 years ago
  
  e034874e
- Try a different approach. · a422e529
  JasperBoom authored 3 years ago
  
  a422e529
- Merge branch 'develop' into PACBIO · e7b9b0ec
  Jasper authored 3 years ago
  
  Unverified
  
  e7b9b0ec
- Try to adjust localization. · 4f879f72
  JasperBoom authored 3 years ago
  
  4f879f72
Jun 11, 2021
- Merge pull request #277 from biowdl/runtime · d4095300
  Jasper authored 3 years ago
  
  fix some runtime settings
  Unverified
  
  d4095300
- Remove weird line. · 833ad0bf
  JasperBoom authored 3 years ago
  
  833ad0bf
- Merge. · a0218ba0
  JasperBoom authored 3 years ago
  
  a0218ba0
- Fix outputs in ccs. · 6356c481
  JasperBoom authored 3 years ago
  
  6356c481
- Merge branch 'develop' into runtime · 50216a3a
  Jasper authored 3 years ago
  
  Unverified
  
  50216a3a
- Merge pull request #279 from biowdl/BIOWDL-531 · 5554189e
  Jasper authored 3 years ago
  
  BIOWDL-531: Update tool versions.
  Unverified
  
  5554189e
- Update scripts. · 460d3d04
  JasperBoom authored 3 years ago
  
  460d3d04
- Fix lima output naming. · 7251bf27
  JasperBoom authored 3 years ago
  
  7251bf27
Jun 10, 2021
- Update tool versions. · a095517d
  JasperBoom authored 3 years ago
  
  a095517d
Jun 07, 2021
- Merge pull request #278 from biowdl/quay-io · 84365831
  Ruben Vorderman authored 3 years ago
  
  Move pacbio-merge image to quay.io
  Unverified
  
  84365831