Commits · 09bf175d9cb45648f5afc99cbfd50f9886c86fbd · biowdl / tasks

Mar 16, 2018
- fix output name stringtie.wdl · 09bf175d
  Cats authored 7 years ago
  
  09bf175d
- Merge branch 'quantification' of https://github.com/biowdl/tasks into quantification · f8fea5fe
  Cats authored 7 years ago
  
  f8fea5fe
- make outputs write to files and prefix is a must · ee155ce8
  Cats authored 7 years ago
  
  ee155ce8
- Merge branch 'master' into quantification · 89801929
  Peter van 't Hof authored 7 years ago
  
  Unverified
  
  89801929
- Merge pull request #3 from biowdl/star · 8155c98c
  Peter van 't Hof authored 7 years ago
  
  modify definition of defaults in star.wdl
  Unverified
  
  8155c98c
- Add quantification tools · 1c1a9554
  Cats authored 7 years ago
  
  1c1a9554
Mar 15, 2018
- modify definition of defaults · 26bf1e15
  DavyCats authored 7 years ago
  
  26bf1e15
- Merge pull request #2 from biowdl/star · a3c50d51
  Peter van 't Hof authored 7 years ago
  
  Star
  Unverified
  
  a3c50d51
- update star.wdl · 19de2c0f
  DavyCats authored 7 years ago
  
  19de2c0f
- Merge branch 'master' of https://github.com/biowdl/tasks into star · 568e9c2e
  DavyCats authored 7 years ago
  
  568e9c2e
Mar 14, 2018
- Added validate step · 664f4787
  Peter van 't Hof authored 7 years ago
  
  664f4787
Mar 13, 2018
- add star task · a8a06cd7
  DavyCats authored 7 years ago
  
  a8a06cd7
Mar 12, 2018
- Adding licence · 034e9ac2
  Peter van 't Hof authored 7 years ago
  
  034e9ac2
- Adding precommands · a4effb10
  Peter van 't Hof authored 7 years ago
  
  a4effb10
Mar 09, 2018
- Adding combineGVFs · ccebb5b5
  Peter van 't Hof authored 7 years ago
  
  ccebb5b5
- Adding combineGVFs · b7e531ee
  Peter van 't Hof authored 7 years ago
  
  b7e531ee
- Added genotyping step · 3dacefb3
  Peter van 't Hof authored 7 years ago
  
  3dacefb3
- Make jar path only · a2d89a91
  Peter van 't Hof authored 7 years ago
  
  a2d89a91
- Fixed argument · 93c2816f
  Peter van 't Hof authored 7 years ago
  
  93c2816f
- Fixed argument · 6663e0b0
  Peter van 't Hof authored 7 years ago
  
  6663e0b0
- Fixed command · c90ca837
  Peter van 't Hof authored 7 years ago
  
  c90ca837
- Adding haplotypecaller step · 49c6df69
  Peter van 't Hof authored 7 years ago
  
  49c6df69
- Fixing creation of directories · fa61ae46
  Peter van 't Hof authored 7 years ago
  
  fa61ae46
- Fixed if · 5ba7837c
  Peter van 't Hof authored 7 years ago
  
  5ba7837c
- Fixed if · ba792ad0
  Peter van 't Hof authored 7 years ago
  
  ba792ad0
- Fixed if · 8db73c54
  Peter van 't Hof authored 7 years ago
  
  8db73c54
- Fixed if · f5729505
  Peter van 't Hof authored 7 years ago
  
  f5729505
- Switch to bash · 4cefb9aa
  Peter van 't Hof authored 7 years ago
  
  4cefb9aa
Mar 08, 2018
- Fixed argument · e385f934
  Peter van 't Hof authored 7 years ago
  
  e385f934
- Fixed argument · 49f77ae8
  Peter van 't Hof authored 7 years ago
  
  49f77ae8
- Fixed argument · 9f5beefd
  Peter van 't Hof authored 7 years ago
  
  9f5beefd
- Fixed argument · 3d02f8d5
  Peter van 't Hof authored 7 years ago
  
  3d02f8d5
- Fixed file path · 9af24bc2
  Peter van 't Hof authored 7 years ago
  
  9af24bc2
- fixed glob · b3f3b5ce
  Peter van 't Hof authored 7 years ago
  
  b3f3b5ce
- Fixed output files of fastqc · e2c513a9
  Peter van 't Hof authored 7 years ago
  
  e2c513a9
- Added known sites · 7bfb1d6a
  Peter van 't Hof authored 7 years ago
  
  7bfb1d6a
- Fixing sort order · 34befbd7
  Peter van 't Hof authored 7 years ago
  
  34befbd7
- Fixed wrong memory settings · a62332f9
  Peter van 't Hof authored 7 years ago
  
  a62332f9
- Switch to picard markduplicates · a37bdbc6
  Peter van 't Hof authored 7 years ago
  
  a37bdbc6
- added flag · f08dd41f
  Peter van 't Hof authored 7 years ago
  
  f08dd41f