Commits · 9ca827e9edee5685f18481b32b6265899b07280a · Mirrors / biopet.biopet

Jul 07, 2015
- fix for checking if fai is present if not stop running · b605f886
  Sander van der Zeeuw authored 9 years ago
  
  b605f886
Jul 06, 2015
- Change vals to defs · 6645de03
  Peter van 't Hof authored 9 years ago
  
  6645de03
Jul 03, 2015
- Fix gatk shiva unit test · c7847542
  Peter van 't Hof authored 9 years ago
  
  c7847542
- Fix code style warnings · c7b928d3
  Peter van 't Hof authored 9 years ago
  
  c7b928d3
- Fix code style warnings · 2c323f38
  Peter van 't Hof authored 9 years ago
  
  2c323f38
Jul 01, 2015
- Optimize imports · 9812237c
  Peter van 't Hof authored 9 years ago
  
  9812237c
Jun 25, 2015
- Bump version to 0.3.2 · b77d7b4c
  bow authored 9 years ago
  
  View commits for tag v0.3.2 v0.3.2
  
  b77d7b4c
Jun 21, 2015
- Added executables that are missing on a native osx install · dca682a1
  Peter van 't Hof authored 9 years ago
  
  dca682a1
Jun 10, 2015
- Fix gatk version · 1be5eeef
  Peter van 't Hof authored 9 years ago
  
  1be5eeef
Jun 09, 2015
- Added version command · 168c0323
  Peter van 't Hof authored 9 years ago
  
  168c0323
May 26, 2015
- Switched to reference module · 8b7765a4
  Peter van 't Hof authored 9 years ago
  
  8b7765a4
Apr 06, 2015
- Change naming · ba931103
  Peter van 't Hof authored 10 years ago
  
  ba931103
- Switch pipeline to reference module · 1eada82e
  Peter van 't Hof authored 10 years ago
  
  1eada82e
Mar 26, 2015
- Switch to scala 2.10 · 3dc3aad4
  Peter van 't Hof authored 10 years ago
  
  3dc3aad4
Mar 20, 2015
- Switch gatk parts to new memory limits · d1b10c50
  Peter van 't Hof authored 10 years ago
  
  d1b10c50
Mar 19, 2015
- Bump version from 0.3.0 to 0.3.1 · d2efef6d
  Wai Yi Leung authored 10 years ago
  
  d2efef6d
Mar 17, 2015
- Bump version to 0.4.0-DEV · 5bd4ef22
  bow authored 10 years ago
  
  5bd4ef22
Mar 15, 2015
- Update main executable pipelines and tool visibility · ff74a677
  bow authored 10 years ago
  
  ff74a677
Mar 13, 2015
- Bump version to 0.3.0 · c5e27ef2
  bow authored 10 years ago
  
  c5e27ef2
Mar 11, 2015
- Update licenses · 3ec60672
  bow authored 10 years ago
  
  3ec60672
- Bump version to 0.3.0-RC1 · a289c540
  bow authored 10 years ago
  
  a289c540
Mar 10, 2015
- Fix scattercounts · 7a573705
  Peter van 't Hof authored 10 years ago
  
  7a573705
Mar 09, 2015
- Fix on intermeditaite files · dc856bfa
  Peter van 't Hof authored 10 years ago
  
  dc856bfa
- Config name change · 8506c344
  Peter van 't Hof authored 10 years ago
  
  8506c344
Mar 07, 2015
- Adding scala docs · d81585ca
  Peter van 't Hof authored 10 years ago
  
  d81585ca
Mar 05, 2015
- Added scala docs for picard · 15e4e777
  Peter van 't Hof authored 10 years ago
  
  15e4e777
- Change output files handling · 3e44feaf
  Peter van 't Hof authored 10 years ago
  
  3e44feaf
Mar 04, 2015
- Rename Ln.out => Ln.output and Ln.in => Ln.input · 7eae47d3
  bow authored 10 years ago
  
  7eae47d3
- Switched Basty to Shiva · c0a2280c
  Peter van 't Hof authored 10 years ago
  
  c0a2280c
- remove unused import · 5e7634c1
  Peter van 't Hof authored 10 years ago
  
  5e7634c1
- Switch Basty to Shiva · ab50cd4f
  Peter van 't Hof authored 10 years ago
  
  ab50cd4f
- Rename pipelines · 99f18f74
  Peter van 't Hof authored 10 years ago
  
  99f18f74
- Remove non gatk version of shiva from the protected exe · 9c83fc47
  Peter van 't Hof authored 10 years ago
  
  9c83fc47
Mar 03, 2015
- fix bug · a26063f4
  Peter van 't Hof authored 10 years ago
  
  a26063f4
Mar 02, 2015
- Added even more unit tests, now 1408 for gatk pipeline, sadly no 1337 · 17c6f86b
  Peter van 't Hof authored 10 years ago
  
  17c6f86b
- Added unit test to gatk part of shiva · 71264da7
  Peter van 't Hof authored 10 years ago
  
  71264da7
- Added unit test to do some magic · f330f2f8
  Peter van 't Hof authored 10 years ago
  
  f330f2f8
- Added more tests · 68182a4a
  Peter van 't Hof authored 10 years ago
  
  68182a4a
Feb 27, 2015
- Add todo's · e3b3e129
  Peter van 't Hof authored 10 years ago
  
  e3b3e129
- Make samples and libraries Summarizable · 21182480
  Peter van 't Hof authored 10 years ago
  
  21182480