Switched Basty to Shiva

protected/biopet-gatk-pipelines/pom.xml

...main/scala/nl/lumc/sasc/biopet/pipelines/gatk/Basty.scala

.../nl/lumc/sasc/biopet/core/BiopetExecutableProtected.scala

protected/pom.xml

public/basty/.gitignore

public/basty/pom.xml

...ain/scala/nl/lumc/sasc/biopet/pipelines/basty/Basty.scala

...cala/nl/lumc/sasc/biopet/pipelines/basty/BastyTrait.scala

public/basty/src/test/resources/log4j.properties

public/biopet-public-package/pom.xml

...ala/nl/lumc/sasc/biopet/core/BiopetExecutablePublic.scala

public/pom.xml