Commit 226e8f1e authored by Moustakas's avatar Moustakas
Browse files

Improved documentation

parent c1073fd3
......@@ -17,12 +17,13 @@ Usage: BedtoolsCoverageToCounts [options]
-v | --version
Print version
-I <file> | --input <file>
coverage file produced with bedtools
-o <file> | --output <file>
output file name
~~~
input: coverage file produced with bedtools
output: a count file with the counts from the the values inside the coverage file. Where values could be almost everything, e.g.
input: A coverage file produced with bedtools
output: A count file with the counts from the the values inside the coverage file. Where values could be almost everything, e.g.
genes, ensemblIDs etc. etc.
To run the tool:
......
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