Commits · 6300d0512cbacbdcd68359d7eaf8277c0948dc92 · Mirrors / biopet.biopet

Sep 11, 2015
- Tools split into new modules, core and utils are compileable now · eb97957f
  Peter van 't Hof authored 9 years ago
  
  eb97957f
Sep 10, 2015
- Moved config to utils · a81bce67
  Peter van 't Hof authored 9 years ago
  
  a81bce67
Jul 03, 2015
- Fix code style warnings · 2c323f38
  Peter van 't Hof authored 9 years ago
  
  2c323f38
Jul 01, 2015
- Optimize imports · 9812237c
  Peter van 't Hof authored 9 years ago
  
  9812237c
Jun 16, 2015
- Update code to v0.4 branch and fix usage of Ln and memory settings of VMEM,... · 4d46a85e
  Wai Yi Leung authored 9 years ago
  4d46a85e
Feb 13, 2015
- Added test log4j.properties · 64397750
  Peter van 't Hof authored 10 years ago
  
  64397750
Feb 09, 2015
- Remove required from config calls · b8084935
  Peter van 't Hof authored 10 years ago
  
  b8084935
Feb 03, 2015
- Rename libraryId -> libId for consistency · ad0c55bc
  bow authored 10 years ago
  
  ad0c55bc
Jan 30, 2015
- Move SVcallers into the toplevel extensions directory · 43fc01cd
  Wai Yi Leung authored 10 years ago
  
  43fc01cd
- Refactor Yamsvp to new sample/lib model · 0f475cfa
  Wai Yi Leung authored 10 years ago
  
  0f475cfa
Jan 27, 2015
- Mask yamsvp code · 89b2c3cd
  Peter van 't Hof authored 10 years ago
  
  89b2c3cd
Jan 23, 2015
- Generate bamstats on the dedup · 5dad53d7
  Wai Yi Leung authored 10 years ago
  
  5dad53d7
Jan 20, 2015
- Changing pipeline to improved multisampleQScript · 33e6ef14
  Peter van 't Hof authored 10 years ago
  
  33e6ef14
Jan 05, 2015
- Adding IGVTools for creation of TDF files (Wiggle for IGV) · ab220766
  Wai Yi Leung authored 10 years ago
  
  ab220766
- Update yamsvp pipeline, link files · 7f36c0c0
  Wai Yi Leung authored 10 years ago
  
  7f36c0c0
Dec 17, 2014
- Remove the indexing requirement from sambamba, since this does this on the fly since version v0.5.0 · 482ffc59
  Wai Yi Leung authored 10 years ago
  
  482ffc59
Dec 05, 2014
- Added License to header of all files · b2a02952
  Peter van 't Hof authored 10 years ago
  
  b2a02952
Nov 28, 2014
- Fixing names of variables and apply sambamba markduplicates on the merged bam of yamsvp · 0379df8e
  wyleung authored 10 years ago
  
  0379df8e
Nov 22, 2014
- Added yamsvp as artifact · 16392b29
  Peter van 't Hof authored 10 years ago
  
  16392b29