Commit a5d7ff21 authored by Sander Bollen's avatar Sander Bollen
Browse files

typos and grammar

parent 723cb3e4
......@@ -81,7 +81,7 @@ object CheckAllelesVcfInBam extends ToolCommand {
val commandArgs: Args = argsParser.parse(args, Args()) getOrElse sys.exit(1)
if (commandArgs.bamFiles.size != commandArgs.samples.size)
logger.warn("Number of samples is diffrent then number of bam files, left over will be removed")
logger.warn("Number of samples is different from number of bam files: those left over will be removed")
val samReaderFactory = SamReaderFactory.makeDefault
val bamReaders: Map[String, SamReader] = Map(commandArgs.samples zip commandArgs.bamFiles.map(x => samReaderFactory.open(x)): _*)
val bamHeaders = bamReaders.map(x => (x._1, x._2.getFileHeader))
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment