diff --git a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/CheckAllelesVcfInBam.scala b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/CheckAllelesVcfInBam.scala index 23fa77437523b91e425fd89827a385c4aa39e083..126c40e1506b5a9a72295754f185a277072a42f8 100644 --- a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/CheckAllelesVcfInBam.scala +++ b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/CheckAllelesVcfInBam.scala @@ -81,7 +81,7 @@ object CheckAllelesVcfInBam extends ToolCommand { val commandArgs: Args = argsParser.parse(args, Args()) getOrElse sys.exit(1) if (commandArgs.bamFiles.size != commandArgs.samples.size) - logger.warn("Number of samples is diffrent then number of bam files, left over will be removed") + logger.warn("Number of samples is different from number of bam files: those left over will be removed") val samReaderFactory = SamReaderFactory.makeDefault val bamReaders: Map[String, SamReader] = Map(commandArgs.samples zip commandArgs.bamFiles.map(x => samReaderFactory.open(x)): _*) val bamHeaders = bamReaders.map(x => (x._1, x._2.getFileHeader))