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biopet.biopet
Commit a2cba5e1 authored by Peter van 't Hof's avatar Peter van 't Hof
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Fixed type

parent 315f5230
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biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/Star.scala
View file @ a2cba5e1
......@@ -75,7 +75,7 @@ class Star(val root: Configurable) extends BiopetCommandLineFunction with Refere
var genomeSAindexNbases: Option[Int] = config("genomesaindexnbases")
var genomeSAsparseD: Option[Int] = config("genomesasparsed")
var sjdbGTFfile: Option[String] = config("sjdbgtfile")
var sjdbGTFfile: Option[File] = config("sjdbgtfile")
var sjdbGTFchrPrefix: Option[String] = config("sjdbgtfchrprefix")
var sjdbGTFfeatureExon: Option[String] = config("sjdbgtffeatureexon")
var sjdbGTFtagExonParentTranscript: Option[String] = config("sjdbgtftagexonparenttranscript")
......
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