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biopet.biopet
Commits
a2cba5e1
Commit
a2cba5e1
authored
May 17, 2016
by
Peter van 't Hof
Browse files
Fixed type
parent
315f5230
Changes
1
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biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/Star.scala
View file @
a2cba5e1
...
...
@@ -75,7 +75,7 @@ class Star(val root: Configurable) extends BiopetCommandLineFunction with Refere
var
genomeSAindexNbases
:
Option
[
Int
]
=
config
(
"genomesaindexnbases"
)
var
genomeSAsparseD
:
Option
[
Int
]
=
config
(
"genomesasparsed"
)
var
sjdbGTFfile
:
Option
[
String
]
=
config
(
"sjdbgtfile"
)
var
sjdbGTFfile
:
Option
[
File
]
=
config
(
"sjdbgtfile"
)
var
sjdbGTFchrPrefix
:
Option
[
String
]
=
config
(
"sjdbgtfchrprefix"
)
var
sjdbGTFfeatureExon
:
Option
[
String
]
=
config
(
"sjdbgtffeatureexon"
)
var
sjdbGTFtagExonParentTranscript
:
Option
[
String
]
=
config
(
"sjdbgtftagexonparenttranscript"
)
...
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