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biopet.biopet
Commits
a2c4d7bc
Commit
a2c4d7bc
authored
Jan 08, 2016
by
Peter van 't Hof
Browse files
Style fix
parent
565f3979
Changes
1
Hide whitespace changes
Inline
Side-by-side
public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/bowtie/Bowtie2.scala
View file @
a2c4d7bc
...
...
@@ -139,6 +139,7 @@ class Bowtie2(val root: Configurable) extends BiopetCommandLineFunction with Ref
Logging
.
addError
(
s
"No index files found for bowtie2 in: $indexDir with basename: $basename"
)
}
}
/** return commandline to execute */
def
cmdLine
=
required
(
executable
)
+
conditional
(
q
,
"-q"
)
+
...
...
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