Commit 9581d328 authored by sajvanderzeeuw's avatar sajvanderzeeuw
Browse files

Changes in help screen tool BastyGenerateFasta

parent 1c537b84
......@@ -102,10 +102,10 @@ object BastyGenerateFasta extends ToolCommand {
} text ("Output name in fasta file header")
opt[Int]("minAD") unbounded () action { (x, c) =>
c.copy(minAD = x)
} text ("min AD value in vcf file for sample")
} text ("min AD value in vcf file for sample. Defaults to: 8")
opt[Int]("minDepth") unbounded () action { (x, c) =>
c.copy(minDepth = x)
} text ("min detp in bam file")
} text ("min depth in bam file. Defaults to: 8")
opt[File]("reference") unbounded () action { (x, c) =>
c.copy(reference = x)
} text ("Indexed reference fasta file") validate { x =>
......
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