Commit 933194d3 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Merge branch 'feature-fixbedtools_cov_stats' into 'develop'

Feature fixbedtools cov stats

Please merge!@!@!
See also #68

See merge request !47
parents df33687d efa7c989
......@@ -208,9 +208,9 @@ class Coverage(object):
for x in itertools.chain(bp['boxes'], bp['medians'], bp['whiskers'],
bp['caps']):
x.set(color=BLUE, linewidth=1.6)
bp['fliers'][0].set(color=RED, alpha=0.5)
bp['fliers'][1].set(color=GREEN, alpha=0.5)
for flier in bp['fliers']:
plt.setp(flier, color='GREEN', alpha=0.5)
upper_limit = np.percentile(self.cov_counts, percentile_show)
if x_data:
space = (upper_limit - min(x_data)) / 40
......@@ -312,4 +312,4 @@ if __name__ == '__main__':
files = {}
json.dump({'stats': stats, 'files': files}, sys.stdout, sort_keys=True, indent=4,
separators=(',', ': '))
separators=(',', ': '))
\ No newline at end of file
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