diff --git a/biopet-framework/src/main/scripts/nl/lumc/sasc/biopet/scripts/bedtools_cov_stats.py b/biopet-framework/src/main/scripts/nl/lumc/sasc/biopet/scripts/bedtools_cov_stats.py index 2939abea3bf28e1b9e7b2d43863b5cda9a0e1b56..dd56e5edc246c26265c6d72e87a665539f602753 100755 --- a/biopet-framework/src/main/scripts/nl/lumc/sasc/biopet/scripts/bedtools_cov_stats.py +++ b/biopet-framework/src/main/scripts/nl/lumc/sasc/biopet/scripts/bedtools_cov_stats.py @@ -208,9 +208,9 @@ class Coverage(object): for x in itertools.chain(bp['boxes'], bp['medians'], bp['whiskers'], bp['caps']): x.set(color=BLUE, linewidth=1.6) - bp['fliers'][0].set(color=RED, alpha=0.5) - bp['fliers'][1].set(color=GREEN, alpha=0.5) - + for flier in bp['fliers']: + plt.setp(flier, color='GREEN', alpha=0.5) + upper_limit = np.percentile(self.cov_counts, percentile_show) if x_data: space = (upper_limit - min(x_data)) / 40 @@ -312,4 +312,4 @@ if __name__ == '__main__': files = {} json.dump({'stats': stats, 'files': files}, sys.stdout, sort_keys=True, indent=4, - separators=(',', ': ')) + separators=(',', ': ')) \ No newline at end of file