Commit 8b099b94 authored by Peter van 't Hof's avatar Peter van 't Hof

Fixed style

parent 86ad2593
...@@ -5,7 +5,7 @@ import java.io.PrintWriter ...@@ -5,7 +5,7 @@ import java.io.PrintWriter
import nl.lumc.sasc.biopet.extensions.gatk.CombineVariants import nl.lumc.sasc.biopet.extensions.gatk.CombineVariants
import nl.lumc.sasc.biopet.extensions.samtools.SamtoolsMpileup import nl.lumc.sasc.biopet.extensions.samtools.SamtoolsMpileup
import nl.lumc.sasc.biopet.extensions.varscan.{ FixMpileup, VarscanMpileup2cns } import nl.lumc.sasc.biopet.extensions.varscan.{ FixMpileup, VarscanMpileup2cns }
import nl.lumc.sasc.biopet.extensions.{Bgzip, Tabix} import nl.lumc.sasc.biopet.extensions.{ Bgzip, Tabix }
import nl.lumc.sasc.biopet.utils.config.Configurable import nl.lumc.sasc.biopet.utils.config.Configurable
/** /**
......
...@@ -64,7 +64,7 @@ class ShivaVariantcallingTest extends TestNGSuite with Matchers { ...@@ -64,7 +64,7 @@ class ShivaVariantcallingTest extends TestNGSuite with Matchers {
raw: Boolean, raw: Boolean,
bcftools: Boolean, bcftools: Boolean,
bcftoolsSinglesample: Boolean, bcftoolsSinglesample: Boolean,
freebayes: Boolean, freebayes: Boolean,
varscanCnsSinglesample: Boolean) = { varscanCnsSinglesample: Boolean) = {
val callers: ListBuffer[String] = ListBuffer() val callers: ListBuffer[String] = ListBuffer()
if (raw) callers.append("raw") if (raw) callers.append("raw")
......
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