Commit 860441ab authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix intervals

parent 04f35d97
......@@ -30,7 +30,7 @@ class SamtoolsMpileup(val root: Configurable) extends Samtools {
@Input(doc = "Reference fasta")
var reference: File = config("reference")
@Input(doc = "Interval bed")
@Input(doc = "Interval bed", required = false)
var intervalBed: Option[File] = config("interval_bed")
var disableBaq: Boolean = config("disable_baq", default = false)
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