Commit 82ad6a8f authored by Wai Yi Leung's avatar Wai Yi Leung
Browse files

Merge branch 'patch-mpileup' into 'develop'

Fix intervals

Fix for #128

See merge request !145
parents e35cb525 860441ab
......@@ -30,7 +30,7 @@ class SamtoolsMpileup(val root: Configurable) extends Samtools {
@Input(doc = "Reference fasta")
var reference: File = config("reference")
@Input(doc = "Interval bed")
@Input(doc = "Interval bed", required = false)
var intervalBed: Option[File] = config("interval_bed")
var disableBaq: Boolean = config("disable_baq", default = false)
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