Commit 5513ff7e authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix multisample namePrefix

parent c86677ba
...@@ -15,7 +15,7 @@ class ShivaGatk(val root: Configurable) extends QScript with ShivaTrait { ...@@ -15,7 +15,7 @@ class ShivaGatk(val root: Configurable) extends QScript with ShivaTrait {
override def makeVariantcalling(multisample: Boolean = false): ShivaVariantcallingTrait = { override def makeVariantcalling(multisample: Boolean = false): ShivaVariantcallingTrait = {
if (multisample) new ShivaVariantcallingGatk(qscript) { if (multisample) new ShivaVariantcallingGatk(qscript) {
override def namePrefix = "multisample." override def namePrefix = "multisample"
override def configName = "shivavariantcalling" override def configName = "shivavariantcalling"
override def configPath: List[String] = super.configPath ::: "multisample" :: Nil override def configPath: List[String] = super.configPath ::: "multisample" :: Nil
} }
......
...@@ -29,7 +29,7 @@ trait ShivaTrait extends MultiSampleQScript with SummaryQScript { ...@@ -29,7 +29,7 @@ trait ShivaTrait extends MultiSampleQScript with SummaryQScript {
def makeVariantcalling(multisample: Boolean = false): ShivaVariantcallingTrait = { def makeVariantcalling(multisample: Boolean = false): ShivaVariantcallingTrait = {
if (multisample) new ShivaVariantcalling(qscript) { if (multisample) new ShivaVariantcalling(qscript) {
override def namePrefix = "multisample." override def namePrefix = "multisample"
override def configName = "shivavariantcalling" override def configName = "shivavariantcalling"
override def configPath: List[String] = super.configPath ::: "multisample" :: Nil override def configPath: List[String] = super.configPath ::: "multisample" :: Nil
} }
......
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