Skip to content
Snippets Groups Projects
Commit 10835803 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Raise default memory for varscan

parent 3f85a446
No related branches found
No related tags found
No related merge requests found
......@@ -39,6 +39,8 @@ class VarscanMpileup2cns(val root: Configurable) extends Varscan {
var vcfSampleList: Option[File] = config("vcf_sample_list")
var variants: Option[Int] = config("variants")
override def defaultCoreMemory = 6.0
override def beforeGraph(): Unit = {
val validValues: Set[Int] = Set(0, 1)
// check for boolean vars that are passed as ints
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment