Shark Wiki page

Website and materials for our Git courses

Supporting material for our programming course

Data analysis skeleton.

Various tools operating over VCF files. Uses cyvcf2 and cython under the hood for speed

This is the user guide for the Shark CentOS-8 Slurm-20.02 cluster. This will give the user a short introduction to the cluster and how to use it.

Interactive Volcano Plots

Data analysis tools for Next Generation Sequencing of forensic DNA markers, including tools for characterisation and filtering of PCR stutter artefacts and other systemic noise, and for automatic detection of the alleles in a sample.

Rig framework pipeline -- magpie