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Cython bindings and Python interface to HMMER3.

Comparative genomics project of Ruminococcus gnavus, with additional prevalence and abundance analysis of worldwide metagenomic datasets.

A NumPy port of the foldseek code for encoding protein structures to 3di.

Mirror of https://github.com/LOVDnl/LOVD3.git

Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.

Physicochemical properties and indices for amino-acid sequences (ported from R).

Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes.

Rust re-implementation of the MinCED algorithm to Detect Instances of CRISPRs in Environmental Data.

A lightweight platform-accelerated library for biological motif scanning using position weight matrices.

Flask web application for PONGS project.

A Python interface to gb-io, a fast GenBank parser and serializer written in Rust.

Cython bindings and Python interface to trimAl, a tool for automated alignment trimming.

Code and tables for translation from variants to haplotypes.

MassyTools, ported to Python 3

Cython bindings and Python interface to Jess, a 3D template matching software.