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RNA-seq pipeline for AML diagnostics. Illustration from Anatomy & Physiology, licenced under the Creative Commons Attribution 3.0 Unported

Fork of part 3 analysis of the script

Supporting material for our programming course

Analyses of antimicrobial resistance genes in metagenomic data from patients with (multiple) recurrent Clostridioides difficile infections and their faecal microbiota transplantation donors - with culture data from multidrug resistant organisms

This is the user guide for the Shark CentOS-8 Slurm-20.02 cluster. This will give the user a short introduction to the cluster and how to use it.

Pipeline to pre-process vcf and gvcf files and submit them to varda.lumc.nl

Snakemake-based WES/IDP pipeline for LDGA.