Commits · fb91a02460b22501cc1c57dc381a486a29b01fbd · biowdl / tasks

Jan 27, 2022
- update healthchecker · fb91a024
  Cats authored 3 years ago
  
  fb91a024
Jan 26, 2022
- adress comments · bf4c1a3e
  Cats authored 3 years ago
  
  bf4c1a3e
Nov 15, 2021
- make recovery sv vcf optional in purple · e9f3c5fd
  Cats authored 3 years ago
  
  e9f3c5fd
Sep 24, 2021
- adjust resource settings · a7a504e4
  Cats authored 3 years ago
  
  a7a504e4
- fix protect command with multiple doids · 15b12101
  Cats authored 3 years ago
  
  15b12101
Jul 29, 2021
- update linx version · dce31f57
  Cats authored 3 years ago
  
  dce31f57
Jul 09, 2021
- fix linx output · ed6061d1
  Cats authored 3 years ago
  
  ed6061d1
- change docker image for purple · c47163aa
  Cats authored 3 years ago
  
  c47163aa
- update purple and gripss versions · e470f59f
  Cats authored 3 years ago
  
  e470f59f
Jul 08, 2021
- fix gripss version in command · f62a7424
  Cats authored 3 years ago
  
  f62a7424
- update gripss version · 57211488
  Cats authored 3 years ago
  
  57211488
Jun 29, 2021
- add protect · f169d785
  Cats authored 3 years ago
  
  f169d785
- add virusinterpreter · c2f223eb
  Cats authored 3 years ago
  
  c2f223eb
Jun 28, 2021
- update some version and add repeatmasker annotation for gridss · 545f63af
  Cats authored 3 years ago
  
  545f63af
Jun 22, 2021
- fix missing backslashes · 664325fc
  Cats authored 3 years ago
  
  664325fc
- remove rainfall plot output · 7a693a69
  Cats authored 3 years ago
  
  7a693a69
Jun 21, 2021
- increase memory for amber · 1be4badc
  Cats authored 3 years ago
  
  1be4badc
Jun 16, 2021
- fix typo · c0477edf
  Cats authored 3 years ago
  
  c0477edf
Jun 15, 2021
- add cuppa and cuppa chart · de03877e
  Cats authored 3 years ago
  
  de03877e
May 19, 2021
- adjust runtime settings · 32c08100
  Cats authored 3 years ago
  
  32c08100
Apr 20, 2021
- add missing purple outputs, fix typo · 51e524a7
  Cats authored 3 years ago
  
  51e524a7
Apr 15, 2021
- upgrade sage version · e81de32b
  Cats authored 4 years ago
  
  e81de32b
Apr 13, 2021
- remove unused parameter_meta · bf438865
  Cats authored 4 years ago
  
  bf438865
- remove ref_genome from Linx · 0013a031
  Cats authored 4 years ago
  
  0013a031
- add germline options to purple · 22933762
  Cats authored 4 years ago
  
  22933762
Apr 12, 2021
- memory and runtime adjustements · 0862eab3
  Cats authored 4 years ago
  
  0862eab3
Mar 11, 2021
- add array for circos confs · 13967b17
  Cats authored 4 years ago
  
  13967b17
- add circos configs to purple output · 8623c57d
  Cats authored 4 years ago
  
  8623c57d
Feb 22, 2021
- fix purple output for newer version · 42f6cd2a
  Cats authored 4 years ago
  
  42f6cd2a
Feb 19, 2021
- fix sage · adc35238
  Cats authored 4 years ago
  
  adc35238
Feb 16, 2021
- fix parameter_meta purple · 943f9541
  Cats authored 4 years ago
  
  943f9541
- update versions, memory, etc · 2792266f
  Cats authored 4 years ago
  
  2792266f
Feb 09, 2021
- small adjustments · eac2b302
  Cats authored 4 years ago
  
  eac2b302
Feb 04, 2021
- add health-checker · 558c8088
  Cats authored 4 years ago
  
  558c8088
Jan 28, 2021
- fix some issues, add flagstat · 96fa1bc6
  Cats authored 4 years ago
  
  96fa1bc6
Jan 21, 2021
- fix typos · 111a42bf
  Cats authored 4 years ago
  
  111a42bf
Jan 15, 2021
- add linx task, add more inputs to sage · c22629ff
  Cats authored 4 years ago
  
  c22629ff
Jan 06, 2021
- comment out healthchecker task and remove duplicate input in bcftools annotate · c482e833
  Cats authored 4 years ago
  
  c482e833
- add note to HealthChecker · 48d468d7
  Cats authored 4 years ago
  
  48d468d7
Dec 16, 2020
- add purple outputs · 9896f4fc
  Cats authored 4 years ago
  
  9896f4fc