Commits · fa1901c451dc3465e94d1b3b36be26a7260203b7 · biowdl / tasks

May 14, 2020
- adress comments · fa1901c4
  Cats authored 4 years ago
  
  fa1901c4
- Merge remote-tracking branch 'origin' into time_minutes · 160bd925
  Cats authored 4 years ago
  
  160bd925
- Merge pull request #207 from biowdl/starIndex · 7e60cb68
  Cats authored 4 years ago
  
  Add Star index task
  7e60cb68
- Merge branch 'develop' into starIndex · ef20cff3
  Cats authored 4 years ago
  
  ef20cff3
- update changelog · a4319c3e
  Cats authored 4 years ago
  
  a4319c3e
- Merge remote-tracking branch 'origin' into time_minutes · 8c2cb732
  Cats authored 4 years ago
  
  8c2cb732
- adjust time_minuteso · e39ea045
  Cats authored 4 years ago
  
  e39ea045
May 13, 2020
- time_minutes · 3b8ca6a8
  Cats authored 4 years ago
  
  3b8ca6a8
May 11, 2020
- Merge pull request #217 from biowdl/BIOWDL-457 · 57edcae1
  Ruben Vorderman authored 4 years ago
  
  Add necessary options for RNA genotyping to haplotypecaller.
  57edcae1
- Add extra parameter_meta options for haplotypecaller · 6693dcfa
  Ruben Vorderman authored 4 years ago
  
  6693dcfa
- Record change in changelog · 73867fd5
  Ruben Vorderman authored 4 years ago
  
  73867fd5
- time_minutes · 6b8a7551
  Cats authored 4 years ago
  
  6b8a7551
May 08, 2020
- make minconfidence treshold optional · 5ca28720
  Ruben Vorderman authored 4 years ago
  
  5ca28720
- add options specific for RNA haplotype calling · 859b722f
  Ruben Vorderman authored 4 years ago
  
  859b722f
May 07, 2020
- fix task order samtools and remove duplicate task · ac71e415
  Cats authored 4 years ago
  
  ac71e415
- fix samtools sort · 1a90d56f
  Cats authored 4 years ago
  
  1a90d56f
May 06, 2020
- Merge remote-tracking branch 'origin/develop' into time_minutes · a16774eb
  Cats authored 4 years ago
  
  a16774eb
- various changes · c33f00ed
  Cats authored 4 years ago
  
  c33f00ed
- minor adjustments · 515df50d
  Cats authored 4 years ago
  
  515df50d
- time_minutes! · 84ba1ef7
  Cats authored 4 years ago
  
  84ba1ef7
May 01, 2020
- more time_minutes · 287fc970
  Cats authored 4 years ago
  
  287fc970
Apr 30, 2020
- Merge pull request #216 from biowdl/BIOWDL-453 · a94a1d4b
  Jasper authored 4 years ago
  
  BIOWDL-453: Fix quotations in samtools sort.
  a94a1d4b
- Update CHANGELOG.md · 8aafaabd
  Jasper authored 4 years ago
  
  Co-Authored-By: DavyCats <davycats.dc@gmail.com>
  8aafaabd
Apr 28, 2020
- Fix CHANGELOG. · 169de2d4
  JasperBoom authored 4 years ago
  
  169de2d4
- Fix quotations in samtools sort. · d9265c31
  JasperBoom authored 4 years ago
  
  d9265c31
Apr 21, 2020
- Merge pull request #215 from biowdl/BIOWDL-450 · fd60df60
  Jasper authored 4 years ago
  
  BIOWDL-450: Update/add new tasks to samtools and picard.
  fd60df60
- Update CHANGELOG.md. · 78cb350a
  JasperBoom authored 4 years ago
  
  78cb350a
- Fix travis error. · c03c5562
  JasperBoom authored 4 years ago
  
  c03c5562
- Reinstate symlink. · a80da1d9
  JasperBoom authored 4 years ago
  
  a80da1d9
- Address comments. · 441890ee
  JasperBoom authored 4 years ago
  
  441890ee
- Add GC parameter. · f423e53e
  JasperBoom authored 4 years ago
  
  f423e53e
- Update documentation. · 90c0270d
  JasperBoom authored 4 years ago
  
  90c0270d
- Address GitHub comments. · e3890adf
  JasperBoom authored 4 years ago
  
  e3890adf
Apr 20, 2020
- Fix travis error. · 7627c314
  JasperBoom authored 4 years ago
  
  7627c314
- Add new tasks to samtools and picard. · 117bde45
  JasperBoom authored 4 years ago
  
  117bde45
Apr 15, 2020
- Merge pull request #214 from biowdl/BIOWDL-449 · afb07b5a
  Jasper authored 4 years ago
  
  BIOWDL-449: Remove dirname command from output folder creation step.
  afb07b5a
- Update brackets. · 92c7e923
  JasperBoom authored 4 years ago
  
  92c7e923
- Remove dirname command from output folder creation step. · 98494a21
  JasperBoom authored 4 years ago
  
  98494a21
Apr 14, 2020
- Merge pull request #213 from biowdl/BIOWDL-448 · 3cc32bc7
  Jasper authored 4 years ago
  
  BIOWDL-448: Isoseq3 requires more memory by default.
  3cc32bc7
- Update CHANGELOG. · c10cc771
  JasperBoom authored 4 years ago
  
  c10cc771