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Commit 92c7e923 authored by JasperBoom's avatar JasperBoom
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Update brackets.

parent 98494a21
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......@@ -35,7 +35,7 @@ task Refine {
String dockerImage = "quay.io/biocontainers/isoseq3:3.3.0--0"
}
command <<<
command {
set -e
mkdir -p "~{outputDir}"
isoseq3 refine \
......@@ -47,7 +47,7 @@ task Refine {
~{inputBamFile} \
~{primerFile} \
"~{outputDir}/~{outputNamePrefix}.bam"
>>>
}
output {
File outputFLNCfile = outputDir + "/" + outputNamePrefix + ".bam"
......
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