Commits · dc25ddabb5810c74887168915d0e092a3e4e8686 · biowdl / tasks

Nov 26, 2019
- Merge pull request #163 from biowdl/BIOWDL-357 · dc25ddab
  Ruben Vorderman authored 5 years ago
  
  update memory for combine gvcfs
  Unverified
  
  dc25ddab
- update changelog · 16b53a21
  Ruben Vorderman authored 5 years ago
  
  16b53a21
- make intervals optional · 4bb43f8e
  Ruben Vorderman authored 5 years ago
  
  4bb43f8e
Nov 25, 2019
- update changelog · 5a2e0ac6
  Ruben Vorderman authored 5 years ago
  
  5a2e0ac6
- update biowdl-input-converter · 90c09dd6
  Ruben Vorderman authored 5 years ago
  
  90c09dd6
Nov 19, 2019
- some memory to be on the safe side · 057316ea
  Ruben Vorderman authored 5 years ago
  
  057316ea
- updated changelog · 0b5217d5
  Ruben Vorderman authored 5 years ago
  
  0b5217d5
- update memory for combine gvcfs · cc62e30b
  Ruben Vorderman authored 5 years ago
  
  cc62e30b
- update scripts to latest master · e18eed74
  Ruben Vorderman authored 5 years ago
  
  e18eed74
Nov 07, 2019
- Merge pull request #161 from biowdl/BIOWDL-354 · c9ec2639
  Jasper Boom authored 5 years ago
  
  BIOWDL-354: Update parameter_meta and TALON task cores.
  Unverified
  
  c9ec2639
- Fixed travis failure. · 07bac37b
  JB authored 5 years ago
  
  07bac37b
- Specified cores update for TALON in CHANGELOG.md. · b6755add
  JB authored 5 years ago
  
  b6755add
- Addressed PR comments. · e1401cec
  JB authored 5 years ago
  
  e1401cec
Nov 06, 2019
- Fix womtools validate warnings. · 04a4f7d5
  JB authored 5 years ago
  
  04a4f7d5
- Update submodules. · b526d542
  JB authored 5 years ago
  
  b526d542
- Update CHANGELOG.md. · ff66bd0f
  JB authored 5 years ago
  
  ff66bd0f
- Update parameter_meta sections for Minimap2 and TranscriptClean. · 34b221f2
  JB authored 5 years ago
  
  34b221f2
- Update number of cores for TALON. · 08f5b977
  JB authored 5 years ago
  
  08f5b977
Nov 05, 2019
- Merge pull request #160 from biowdl/BIOWDL-354 · 1ea50377
  Jasper Boom authored 5 years ago
  
  Update TALON to version 4.4
  Unverified
  
  1ea50377
- Update submodules · c0cb0012
  JB authored 5 years ago
  
  c0cb0012
- Fix conflicts with remote · 83256df2
  JB authored 5 years ago
  
  83256df2
- Update CHANGELOG.md · d42b3593
  JB authored 5 years ago
  
  d42b3593
- Update TALON to version 4.4 · 2e1ef62b
  JB authored 5 years ago
  
  2e1ef62b
Nov 01, 2019
- Merge pull request #159 from biowdl/paramter_meta · 452d7a50
  Cats authored 5 years ago
  
  add paramter_meta to htseq, cutadapt, collect-columns, stringtie and fastqc
  Unverified
  
  452d7a50
Oct 31, 2019
- adress comments · d77aee4c
  Cats authored 5 years ago
  
  d77aee4c
- update changelog · 6ee7e90d
  Cats authored 5 years ago
  
  6ee7e90d
- typo · cd57b145
  Cats authored 5 years ago
  
  cd57b145
- add parameter_meta to fastqc · 2fe5710c
  Cats authored 5 years ago
  
  2fe5710c
Oct 30, 2019
- fix htseq parameter_meta · 1034cd0f
  Cats authored 5 years ago
  
  1034cd0f
- add parameter_meta to cutadapt · aea3dc7b
  Cats authored 5 years ago
  
  aea3dc7b
- Merge remote-tracking branch 'origin/develop' into paramter_meta · ea96b078
  Cats authored 5 years ago
  
  ea96b078
Oct 28, 2019
- Merge pull request #158 from biowdl/BIOWDL-344 · 7b420ca3
  Cats authored 5 years ago
  
  Changes for RNA pipeline
  Unverified
  
  7b420ca3
- remove redundant comment · 907fb214
  Ruben Vorderman authored 5 years ago
  
  907fb214
- add changes to log · 6d46f013
  Ruben Vorderman authored 5 years ago
  
  6d46f013
- fix samtools index · 60c48b64
  Ruben Vorderman authored 5 years ago
  
  60c48b64
- make sure directory is present · eaba2f12
  Ruben Vorderman authored 5 years ago
  
  eaba2f12
- update star · c4085415
  Ruben Vorderman authored 5 years ago
  
  c4085415
- syntax error · d87976bf
  Ruben Vorderman authored 5 years ago
  
  d87976bf
- hisat should deliver an indexed bam · 7a9d3cd4
  Ruben Vorderman authored 5 years ago
  
  7a9d3cd4
Oct 15, 2019
- Merge pull request #157 from biowdl/BIOWDL-327 · f4ed41c4
  JB authored 5 years ago
  
  BIOWDL-327: Update TranscriptClean to version 2.0.2
  Unverified
  
  f4ed41c4