Commits · 7c39cc669b1c1409001f3f4eb2a6b4a65929e07a · biowdl / tasks

Apr 04, 2018
- give sampleConfig more memory · 7c39cc66
  Cats authored 6 years ago
  
  7c39cc66
- add Xmx to sampleConfig · f7d97af6
  Cats authored 6 years ago
  
  f7d97af6
- fix SamplConfig dirname · 67fed40a
  Cats authored 6 years ago
  
  67fed40a
Apr 03, 2018
- add runtime settings · 93240a92
  Cats authored 6 years ago
  
  93240a92
Mar 29, 2018
- Merge pull request #7 from biowdl/intervals_SplitNCigarReads · 592164c0
  Peter van 't Hof authored 6 years ago
  
  add intervals option to SplitNCigarReads
  592164c0
- Merge branch 'master' into intervals_SplitNCigarReads · a09e3a5f
  Peter van 't Hof authored 6 years ago
  
  a09e3a5f
- Merge pull request #6 from biowdl/mergeCounts · 8159674a
  Peter van 't Hof authored 6 years ago
  
  add merge counts
  8159674a
- Merge branch 'master' into mergeCounts · bd611a3b
  Peter van 't Hof authored 6 years ago
  
  bd611a3b
- Merge pull request #4 from biowdl/quantification · fddfd687
  Peter van 't Hof authored 6 years ago
  
  Add quantification tools
  fddfd687
- Merge branch 'master' into quantification · eca9a4b6
  Peter van 't Hof authored 6 years ago
  
  eca9a4b6
Mar 21, 2018
- add intervals option to SplitNCigarReads · a7104e27
  Cats authored 7 years ago
  
  a7104e27
Mar 20, 2018
- Merge branch 'master' into mergeCounts · 8a800556
  Peter van 't Hof authored 7 years ago
  
  8a800556
- Merge pull request #5 from biowdl/splitNCigarReads · 385a1dfc
  Peter van 't Hof authored 7 years ago
  
  add SplitNCigarReads
  385a1dfc
- add precommand · b8414e7a
  Cats authored 7 years ago
  
  b8414e7a
- Merge branch 'splitNCigarReads' of https://github.com/biowdl/tasks into splitNCigarReads · 9766b090
  Cats authored 7 years ago
  
  9766b090
- add fasta index and dict · 33f3aa9a
  Cats authored 7 years ago
  
  33f3aa9a
- change to heredoc · b6b2b73e
  Cats authored 7 years ago
  
  b6b2b73e
Mar 19, 2018
- Merge branch 'master' into splitNCigarReads · 5d9cab2d
  Peter van 't Hof authored 7 years ago
  
  5d9cab2d
- add merge counts · 225505cf
  Cats authored 7 years ago
  
  225505cf
- add SplitNCigarReads · 817cb4ce
  Cats authored 7 years ago
  
  817cb4ce
Mar 16, 2018
- fix geneAbundance · 413953d8
  Cats authored 7 years ago
  
  413953d8
- add abundance file option to stringtie · 366f8ef1
  Cats authored 7 years ago
  
  366f8ef1
- add strandedness to stringtie · e5a86409
  Cats authored 7 years ago
  
  e5a86409
- fix output name stringtie.wdl · 09bf175d
  Cats authored 7 years ago
  
  09bf175d
- Merge branch 'quantification' of https://github.com/biowdl/tasks into quantification · f8fea5fe
  Cats authored 7 years ago
  
  f8fea5fe
- make outputs write to files and prefix is a must · ee155ce8
  Cats authored 7 years ago
  
  ee155ce8
- Merge branch 'master' into quantification · 89801929
  Peter van 't Hof authored 7 years ago
  
  89801929
- Merge pull request #3 from biowdl/star · 8155c98c
  Peter van 't Hof authored 7 years ago
  
  modify definition of defaults in star.wdl
  8155c98c
- Add quantification tools · 1c1a9554
  Cats authored 7 years ago
  
  1c1a9554
Mar 15, 2018
- modify definition of defaults · 26bf1e15
  DavyCats authored 7 years ago
  
  26bf1e15
- Merge pull request #2 from biowdl/star · a3c50d51
  Peter van 't Hof authored 7 years ago
  
  Star
  a3c50d51
- update star.wdl · 19de2c0f
  DavyCats authored 7 years ago
  
  19de2c0f
- Merge branch 'master' of https://github.com/biowdl/tasks into star · 568e9c2e
  DavyCats authored 7 years ago
  
  568e9c2e
Mar 14, 2018
- Added validate step · 664f4787
  Peter van 't Hof authored 7 years ago
  
  664f4787
Mar 13, 2018
- add star task · a8a06cd7
  DavyCats authored 7 years ago
  
  a8a06cd7
Mar 12, 2018
- Adding licence · 034e9ac2
  Peter van 't Hof authored 7 years ago
  
  034e9ac2
- Adding precommands · a4effb10
  Peter van 't Hof authored 7 years ago
  
  a4effb10
Mar 09, 2018
- Adding combineGVFs · ccebb5b5
  Peter van 't Hof authored 7 years ago
  
  ccebb5b5
- Adding combineGVFs · b7e531ee
  Peter van 't Hof authored 7 years ago
  
  b7e531ee
- Added genotyping step · 3dacefb3
  Peter van 't Hof authored 7 years ago
  
  3dacefb3