add fasta index and dict

33f3aa9a · Cats · 817cb4ce · 33f3aa9a
Commit 33f3aa9a authored 7 years ago by Cats
--- a/gatk.wdl
+++ b/gatk.wdl
@@ -200,6 +200,8 @@ task SplitNCigarReads {

    File input_bam
    File ref_fasta
+    File ref_fasta_index
+    File ref_dict
    String output_bam
    String gatk_jar