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Commit efb8bc22 authored by JasperBoom's avatar JasperBoom
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Update output names.

parent 56c6f23e
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......@@ -65,8 +65,8 @@ task Refine {
>>>
output {
Array[File] outputFLfile = glob("~{basename(outputPrefix)}*.bam")
Array[File] outputFLindexFile = glob("~{basename(outputPrefix)}*.bam.pbi")
Array[File] outputFLNCfile = glob("~{basename(outputPrefix)}*.bam")
Array[File] outputFLNCindexFile = glob("~{basename(outputPrefix)}*.bam.pbi")
Array[File] outputConsensusReadsetFile = glob("~{basename(outputPrefix)}*.consensusreadset.xml")
Array[File] outputFilterSummaryFile = glob("~{basename(outputPrefix)}*.filter_summary.json")
Array[File] outputReportFile = glob("~{basename(outputPrefix)}*.report.csv")
......
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